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L3_121_000G1_scaffold_741

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_741_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(424..1986)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVA3_9BIFI
DNA polymerase III {ECO:0000313|EMBL:KFI67434.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
DNA polymerase III subunit epsilon
L3_121_000G1_scaffold_741_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2573..3229)
DNA (657bp) protein (219aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
Peptide deformylase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVA5_9BIFI
peptide deformylase
L3_121_000G1_scaffold_741_3
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3293..4675)
DNA (1383bp) protein (461aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Phosphoglucosamine mutase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVA6_9BIFI
phosphoglucosamine mutase
L3_121_000G1_scaffold_741_4
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5077..7686)
DNA (2610bp) protein (870aa)
Aminopeptidase {ECO:0000313|EMBL:BAR02307.1}; Membrane alanyl aminopeptidase {ECO:0000313|EMBL:EEB21308.1}; EC=3.4.11.2 {ECO:0000313|EMBL:EEB21308.1};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Membrane alanyl aminopeptidase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVA8_9BIFI
aminopeptidase N
L3_121_000G1_scaffold_741_5
unknown

Not on your lists

comp(7780..7884)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_121_000G1_scaffold_741_6
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7881..9935)
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVA9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21309.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_121_000G1_scaffold_741_7
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10123..10968)
DNA (846bp) protein (282aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB1_9BIFI
dihydrodipicolinate synthase
L3_121_000G1_scaffold_741_8
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11304..14183)
DNA (2880bp) protein (960aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EEB21312.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EEB21312.1};; Copper-transporting ATPase {ECO:0000313|EMBL:BAR02310.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Copper-exporting ATPase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB2_9BIFI
heavy metal transporter
L3_121_000G1_scaffold_741_9
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14382..15134)
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB3_9BIFI
4-hydroxy-tetrahydrodipicolinate reductase
L3_121_000G1_scaffold_741_10
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15298..16662)
DNA (1365bp) protein (455aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB4_9BIFI
Putative transport protein {ECO:0000313|EMBL:BAR02312.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
MFS transporter
L3_121_000G1_scaffold_741_11
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16852..21030)
DNA (4179bp) protein (1393aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
UvrD/REP helicase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB6_9BIFI
ATP-dependent DNA helicase UvrD
L3_121_000G1_scaffold_741_12
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21027..25088)
DNA (4062bp) protein (1354aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR02314.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ATP-dependent DNA helicase
L3_121_000G1_scaffold_741_13
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25326..26750
DNA (1425bp) protein (475aa)
Kinase domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB8_9BIFI
Kinase domain protein {ECO:0000313|EMBL:EEB21318.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
kinase
L3_121_000G1_scaffold_741_14
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26856..32885
DNA (6030bp) protein (2010aa)
Fibronectin type III domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVB9_9BIFI
Fibronectin type III domain protein {ECO:0000313|EMBL:EEB21319.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ATPase AAA
L3_121_000G1_scaffold_741_15
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32967..34277
DNA (1311bp) protein (437aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVC0_9BIFI
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEB21320.1}; Putative ATPase {ECO:0000313|EMBL:BAR02317.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ATPase AAA
L3_121_000G1_scaffold_741_16
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34404..35588
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVC1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR02318.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_121_000G1_scaffold_741_17
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35585..38101
DNA (2517bp) protein (839aa)
Transglutaminase-like protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVC2_9BIFI
Transglutaminase-like protein {ECO:0000313|EMBL:EEB21322.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR02319.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
transglutaminase
L3_121_000G1_scaffold_741_18
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38070..38273
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVC3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21323.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ppp; phosphoprotein phosphatase
L3_121_000G1_scaffold_741_19
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38376..38984
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVC4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21324.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_121_000G1_scaffold_741_20
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39175..39897)
DNA (723bp) protein (241aa)
FHA domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVC5_9BIFI
FHA domain protein {ECO:0000313|EMBL:EEB21325.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR02321.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
signal peptide protein
L3_121_000G1_scaffold_741_21
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39954..43967)
DNA (4014bp) protein (1338aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRU3_9BIFI
DNA-directed RNA polymerase subunit beta'
L3_121_000G1_scaffold_741_22
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44059..47619)
DNA (3561bp) protein (1187aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
DNA-directed RNA polymerase subunit beta n=6 Tax=Bifidobacterium RepID=B6XVC8_9BIFI
DNA-directed RNA polymerase subunit beta
L3_121_000G1_scaffold_741_23
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47783..48427)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVC9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21329.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_121_000G1_scaffold_741_24
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48479..49423)
DNA (945bp) protein (315aa)
Putative A/G-specific adenine glycosylase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVD0_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29687.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
adenine glycosylase
L3_121_000G1_scaffold_741_25
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49443..50108
DNA (666bp) protein (222aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVD1_9BIFI
RNA methyltransferase
L3_121_000G1_scaffold_741_26
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50520..51884)
DNA (1365bp) protein (455aa)
UPF0210 protein BIFCAT_01162 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVD3_9BIFI
UPF0210 protein BBCT_1359 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_121_000G1_scaffold_741_27
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51951..52223)
DNA (273bp) protein (91aa)
UPF0237 protein BIFCAT_01163 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVD4_9BIFI
UPF0237 protein BBCT_1360 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_121_000G1_scaffold_741_28
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52456..53154)
DNA (699bp) protein (233aa)
Galactokinase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVD5_9BIFI
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
galactokinase
Displaying 28 items

View Taxonomy