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L3_121_000G1_scaffold_6444

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_6444_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..186)
DNA (186bp) protein (62aa)
50S ribosomal protein L11 n=2 Tax=Bifidobacterium RepID=B6XWH3_9BIFI
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_121_000G1_scaffold_6444_2
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(531..1355)
DNA (825bp) protein (275aa)
Transcription termination/antitermination protein NusG n=3 Tax=root RepID=A0ZZZ4_BIFAA
nusG; transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_121_000G1_scaffold_6444_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1380..1607)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=3 Tax=Bifidobacterium RepID=A0ZZZ3_BIFAA
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_6444_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1973..3181)
DNA (1209bp) protein (403aa)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3T2_BIFAD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AJE05245.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_6444_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3305..4438)
DNA (1134bp) protein (378aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Glutamate 5-kinase n=2 Tax=Bifidobacterium adolescentis RepID=PROB_BIFAA
L3_121_000G1_scaffold_6444_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4521..6212)
DNA (1692bp) protein (564aa)
GTPase Obg n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3T0_BIFAD
GTP-binding protein, GTP1/OBG family
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_121_000G1_scaffold_6444_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6291..6542)
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=10 Tax=Bifidobacterium RepID=RL27_BIFAA
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L3_121_000G1_scaffold_6444_8
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6830..9511)
DNA (2682bp) protein (894aa)
Ribonuclease G {ECO:0000313|EMBL:KFI96419.1}; EC=3.1.26.12 {ECO:0000313|EMBL:KFI96419.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Ribonuclease G n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZY7_BIFAA
ribonuclease G
L3_121_000G1_scaffold_6444_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10096..11292)
DNA (1197bp) protein (399aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EDN83557.1}; EC=3.5.1.18 {ECO:0000313|EMBL:EDN83557.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3S4_BIFAD
succinyl-diaminopimelate desuccinylase
L3_121_000G1_scaffold_6444_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11430..12374
DNA (945bp) protein (315aa)
Transporter auxin efflux carrier (AEC) family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GVV9_9BIFI
Transporter {ECO:0000313|EMBL:KFI96417.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
transporter, auxin efflux carrier domain protein
L3_121_000G1_scaffold_6444_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12422..12529)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRS8_9BIFI
hypothetical protein
Permease {ECO:0000313|EMBL:AII75671.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying 11 items

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