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L3_121_000G1_scaffold_6723

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_6723_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..1026
DNA (1026bp) protein (342aa)
Chaperone protein ClpB n=12 Tax=Bifidobacterium longum RepID=CLPB_BIFLO
clpA2; clpa2
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_121_000G1_scaffold_6723_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1173..2282
DNA (1110bp) protein (370aa)
Putative glutamyl-queuosine tRNA(Asp) synthetase {ECO:0000313|EMBL:KFI70158.1}; EC=6.1.1.17 {ECO:0000313|EMBL:KFI70158.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Putative glutamyl-queuosine tRNA(Asp) synthetase n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BD77_BIFLN
gltX2; gltx2
L3_121_000G1_scaffold_6723_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2308..3417
DNA (1110bp) protein (370aa)
Glycerophosphoryl diester phosphodiesterase n=9 Tax=Bifidobacterium longum RepID=D6ZWM8_BIFLJ
phosphodiesterase
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KEY20655.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_121_000G1_scaffold_6723_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3613..4092)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Ribosomal RNA large subunit methyltransferase H n=19 Tax=Bifidobacterium RepID=RLMH_BIFLD
hypothetical protein
L3_121_000G1_scaffold_6723_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4140..4781)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Uracil phosphoribosyltransferase n=7 Tax=Bifidobacterium RepID=UPP_BIFLD
upp; uracil phosphoribosyltransferase
L3_121_000G1_scaffold_6723_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5182..6315
DNA (1134bp) protein (378aa)
Predicted ATPase (AAA+ superfamily) n=9 Tax=Bifidobacterium RepID=D6DCF9_BIFLN
Predicted ATPase (AAA+ superfamily)
Uncharacterized protein {ECO:0000313|EMBL:AAN25057.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_121_000G1_scaffold_6723_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6402..7061)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZH8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFV37009.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L3_121_000G1_scaffold_6723_8
unknown

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7454..7810
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying 8 items

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