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L3_121_000G1_scaffold_3725

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_3725_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..179
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7Q1_BIFLO
hd superfamily hydrolase
HD domain protein {ECO:0000313|EMBL:EEI80508.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_121_000G1_scaffold_3725_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(258..413)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWG5_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80507.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L3_121_000G1_scaffold_3725_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(413..991)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYJ7_9BIFI
hypothetical protein
Glutamine amidotransferase {ECO:0000313|EMBL:KEY20686.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_121_000G1_scaffold_3725_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1085..3598)
DNA (2514bp) protein (838aa)
Probable potassium transport system protein kup n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWG4_BIFLN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
potassium transporter Kup
L3_121_000G1_scaffold_3725_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3741..4433)
DNA (693bp) protein (231aa)
TatD-related deoxyribonuclease n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWR7_BIFLJ
DNase
TatD family hydrolase {ECO:0000313|EMBL:AIW44378.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_121_000G1_scaffold_3725_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4713..5783
DNA (1071bp) protein (357aa)
Fic/DOC family protein n=4 Tax=Bifidobacterium RepID=E5XYJ4_9BIFI
hypothetical protein
Cell division protein Fic {ECO:0000313|EMBL:KEY32280.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_121_000G1_scaffold_3725_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5712..6029)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7Q6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24045.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_121_000G1_scaffold_3725_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6223..6528
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECV8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55852.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_121_000G1_scaffold_3725_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6396..7322)
DNA (927bp) protein (309aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=9 Tax=Bifidobacterium RepID=D6DCJ5_BIFLN
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK70216.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_121_000G1_scaffold_3725_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7319..8272)
DNA (954bp) protein (318aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWF9_BIFLN
ABC transporter, permease protein {ECO:0000313|EMBL:EEI80501.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_121_000G1_scaffold_3725_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8411..9727)
DNA (1317bp) protein (439aa)
MalE-type ABC sugar transport system periplasmic component n=7 Tax=Bifidobacterium RepID=B3DPD4_BIFLD
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEI80500.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_121_000G1_scaffold_3725_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9937..10050
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AW70_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ23363.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_121_000G1_scaffold_3725_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10145..11179)
DNA (1035bp) protein (345aa)
Predicted beta-xylosidase n=4 Tax=Bifidobacterium longum RepID=D6DCJ8_BIFLN
beta-xylosidase
Predicted beta-xylosidase {ECO:0000313|EMBL:CBK70219.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_121_000G1_scaffold_3725_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11443..12387
DNA (945bp) protein (315aa)
Hydrolase, alpha/beta domain protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3AW47_BIFLN
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EIJ23340.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Esterase/lipase
L3_121_000G1_scaffold_3725_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12499..13557)
DNA (1059bp) protein (353aa)
RbsR-type transcription regulator/Ribose operon repressor n=7 Tax=Bifidobacterium RepID=B3DPD1_BIFLD
RbsR family transcriptional regulator/Ribose operon repressor
Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:EIJ23397.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_121_000G1_scaffold_3725_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13672..15720)
DNA (2049bp) protein (683aa)
Large protein with C-terminal homology to alpha-arabinofuranosidase II n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7R3_BIFLO
large protein with C-terminal homology to alpha-arabinofuranosidase II
Large protein with C-terminal homology to alpha-arabinofuranosidase II {ECO:0000313|EMBL:BAP84427.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_121_000G1_scaffold_3725_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15786..17195
DNA (1410bp) protein (470aa)
Endo-1,5-alpha-L-arabinosidase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYI5_9BIFI
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EIJ23415.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Beta-xylosidase
L3_121_000G1_scaffold_3725_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17352..19076
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECW7_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55861.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
endo-1,5-alpha-L-arabinosidase
L3_121_000G1_scaffold_3725_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18967..21474)
DNA (2508bp) protein (836aa)
Alpha-L-arabinofuranosidase C-terminal domain protein n=5 Tax=Bifidobacterium RepID=I3AW56_BIFLN
Alpha-L-arabinofuranosidase C-terminal domain protein {ECO:0000313|EMBL:EIJ23349.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
alpha-arabinofuranosidase I
L3_121_000G1_scaffold_3725_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21737..23545)
DNA (1809bp) protein (603aa)
ABC-type multidrug transport system ATPase and permease component n=13 Tax=Bifidobacterium RepID=B3DPC6_BIFLD
mdlB5; multidrug ABC transporter ATPase/permease
ABC transporter permease component {ECO:0000313|EMBL:BAJ67485.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_121_000G1_scaffold_3725_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23556..25466)
DNA (1911bp) protein (637aa)
ABC-type multidrug transport system ATPase and permease component n=9 Tax=Bifidobacterium RepID=B3DPC5_BIFLD
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY20691.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
mdlB4; mdlb4
Displaying 21 items

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