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L3_121_000G1_scaffold_2053

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_2053_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(201..1430)
DNA (1230bp) protein (410aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Argininosuccinate synthase n=2 Tax=Clostridiales RepID=D4LZ90_9FIRM
L3_121_000G1_scaffold_2053_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1984..3024
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZ91_9FIRM
L3_121_000G1_scaffold_2053_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3049..3495
DNA (447bp) protein (149aa)
N-acetylglutamate synthase (EC:2.3.1.1)
N-acetylglutamate synthase {ECO:0000313|EMBL:CBL27102.1}; EC=2.3.1.1 {ECO:0000313|EMBL:CBL27102.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
N-acetylglutamate synthase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZ92_9FIRM
L3_121_000G1_scaffold_2053_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3516..4739
DNA (1224bp) protein (408aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Clostridiales RepID=D4LZ93_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2053_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4812..5714
DNA (903bp) protein (301aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Acetylglutamate kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZ94_9FIRM
L3_121_000G1_scaffold_2053_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5701..6882
DNA (1182bp) protein (394aa)
acetylornithine and succinylornithine aminotransferases (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:CBL27105.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Acetylornithine aminotransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZ95_9FIRM
L3_121_000G1_scaffold_2053_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6946..7377
DNA (432bp) protein (144aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Clostridiales RepID=D4LZ96_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC14213.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2053_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7514..8215
DNA (702bp) protein (234aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PWT1_9FIRM
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:CDC14212.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
competence protein ComEA helix-hairpin-helix repeat region
L3_121_000G1_scaffold_2053_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8248..8937
DNA (690bp) protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=3 Tax=root RepID=D4LZ98_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC14211.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2053_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8996..10369
DNA (1374bp) protein (458aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBL27109.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZ99_9FIRM
L3_121_000G1_scaffold_2053_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10380..11312
DNA (933bp) protein (311aa)
Spore germination protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0J6_9FIRM
Spore germination protein {ECO:0000313|EMBL:CDC14209.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Spore germination protein
L3_121_000G1_scaffold_2053_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11309..13606
DNA (2298bp) protein (766aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NPR8_9FIRM
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CDC14208.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
DNA internalization-related competence protein ComEC/Rec2
L3_121_000G1_scaffold_2053_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13618..14655
DNA (1038bp) protein (346aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit n=2 Tax=Clostridiales RepID=D4LZA2_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDC14207.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2053_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14672..16486
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Elongation factor 4 n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6R4_9FIRM
GTP-binding protein LepA
L3_121_000G1_scaffold_2053_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16546..17703
DNA (1158bp) protein (386aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CBL27113.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBL27113.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZA3_9FIRM
L3_121_000G1_scaffold_2053_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17843..18760
DNA (918bp) protein (306aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0J4_9FIRM
L3_121_000G1_scaffold_2053_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18776..19684
DNA (909bp) protein (303aa)
Transcriptional regulators of sugar metabolism n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZA6_9FIRM
Transcriptional regulators of sugar metabolism
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CBL27116.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2053_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19887..20816)
DNA (930bp) protein (310aa)
Predicted permeases n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZB4_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL27124.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2053_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21115..21384
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKS4_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK78298.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_121_000G1_scaffold_2053_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21414..22745)
DNA (1332bp) protein (444aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZB5_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL27125.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2053_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22768..23061)
DNA (294bp) protein (98aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZB6_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL27126.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying 21 items

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