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L3_121_000G1_scaffold_2661

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_2661_1
unknown

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comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_121_000G1_scaffold_2661_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(586..840)
DNA (255bp) protein (85aa)
Helix-turn-helix n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2V8_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL25570.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2661_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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945..1484
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2V9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25571.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2661_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1509..1634
DNA (126bp) protein (42aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25572.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2661_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1644..2072
DNA (429bp) protein (143aa)
Fic family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q7T4_9FIRM
Fic family protein {ECO:0000313|EMBL:ERK52124.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_121_000G1_scaffold_2661_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2010..4766)
DNA (2757bp) protein (919aa)
Predicted permease n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W1_9FIRM
Predicted permease {ECO:0000313|EMBL:CBL25573.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Predicted permease.
L3_121_000G1_scaffold_2661_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4778..5461)
DNA (684bp) protein (228aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W2_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL25574.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2661_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5563..6483)
DNA (921bp) protein (307aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W3_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_121_000G1_scaffold_2661_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6485..7138)
DNA (654bp) protein (218aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W4_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL25576.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2661_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7412..7825
DNA (414bp) protein (138aa)
C_GCAxxG_C_C family probable redox protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W5_9FIRM
C_GCAxxG_C_C family probable redox protein
C_GCAxxG_C_C family probable redox protein {ECO:0000313|EMBL:CBL25577.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2661_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7890..8588)
DNA (699bp) protein (233aa)
eno; 2-phosphoglycerate dehydratase (EC:4.2.1.11)
Enolase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PYK1_9FIRM
Enolase {ECO:0000313|EMBL:CDC14807.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2661_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8804..9646
DNA (843bp) protein (281aa)
Uncharacterized conserved protein n=2 Tax=Clostridiales RepID=D4M2W6_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC14808.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2661_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9684..10409)
DNA (726bp) protein (242aa)
Cell Wall Hydrolase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W7_9FIRM
Cell Wall Hydrolase.
Cell Wall Hydrolase {ECO:0000313|EMBL:CBL25579.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_2661_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10666..11670)
DNA (1005bp) protein (335aa)
Aldo/keto reductases, related to diketogulonate reductase (EC:1.1.1.2 1.1.1.21)
Aldo/keto reductases, related to diketogulonate reductase {ECO:0000313|EMBL:CBL25580.1}; EC=1.1.1.2 {ECO:0000313|EMBL:CBL25580.1};; EC=1.1.1.21 {ECO:0000313|EMBL:CBL25580.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Aldo/keto reductases, related to diketogulonate reductase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2W8_9FIRM
L3_121_000G1_scaffold_2661_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11693..12649)
DNA (957bp) protein (319aa)
1-phosphofructokinase (EC:2.7.1.144)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535, ECO:0000313|EMBL:CBL25581.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Tagatose-6-phosphate kinase n=2 Tax=Clostridiales RepID=D4M2W9_9FIRM
L3_121_000G1_scaffold_2661_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12674..13723)
DNA (1050bp) protein (350aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.251)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=2 Tax=Clostridiales RepID=D4M2X0_9FIRM
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CDC14817.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2661_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13765..15282)
DNA (1518bp) protein (506aa)
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:CBL25583.1}; EC=2.7.1.17 {ECO:0000313|EMBL:CBL25583.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Sugar (Pentulose and hexulose) kinases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2X1_9FIRM
L3_121_000G1_scaffold_2661_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15296..16369)
DNA (1074bp) protein (358aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Transcriptional regulator LacI family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PYL5_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDC14822.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_2661_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16413..17264)
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolases (EC:4.1.2.40 4.1.2.13)
Ketose-bisphosphate aldolases n=2 Tax=Clostridiales RepID=D4M2X3_9FIRM
Ketose-bisphosphate aldolases {ECO:0000313|EMBL:CDC14833.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Displaying 19 items

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