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L3_121_000G1_scaffold_561

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_561_1
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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805..1782
DNA (978bp) protein (326aa)
Sucrose operon repressor n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYK1_9FIRM
Sucrose operon repressor {ECO:0000313|EMBL:CDC17203.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
transcriptional regulator, LacI family
L3_121_000G1_scaffold_561_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2039..3418
DNA (1380bp) protein (460aa)
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6J4_9FIRM
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific {ECO:0000313|EMBL:CBL26856.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_561_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3431..4855
DNA (1425bp) protein (475aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CBL26855.1}; EC=3.2.1.26 {ECO:0000313|EMBL:CBL26855.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Sucrose-6-phosphate hydrolase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6J3_9FIRM
L3_121_000G1_scaffold_561_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5171..6607
DNA (1437bp) protein (479aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Arginine/lysine/ornithine decarboxylases {ECO:0000313|EMBL:CBL26854.1}; EC=4.1.1.18 {ECO:0000313|EMBL:CBL26854.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Arginine/lysine/ornithine decarboxylases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6J2_9FIRM
L3_121_000G1_scaffold_561_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6673..7257
DNA (585bp) protein (195aa)
Guanylate kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6J1_9FIRM
Guanylate kinase
Guanylate kinase {ECO:0000313|EMBL:CBL26853.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_561_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7388..8383
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P926_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC17209.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_561_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8388..9302
DNA (915bp) protein (305aa)
Uncharacterized homolog of PSP1 n=2 Tax=Clostridiales RepID=D4M6I9_9FIRM
Uncharacterized homolog of PSP1
Uncharacterized homolog of PSP1 {ECO:0000313|EMBL:CDC17210.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_561_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9292..10035
DNA (744bp) protein (248aa)
Predicted O-methyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6I8_9FIRM
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBL26850.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_561_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10067..10915
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Clostridiales RepID=D4M6I7_9FIRM
conserved hypothetical protein TIGR00096
L3_121_000G1_scaffold_561_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10961..11617)
DNA (657bp) protein (219aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6I6_9FIRM
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL26848.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_561_11
unknown

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11723..11815
DNA (93bp) protein (31aa)

This feature has no annotations

L3_121_000G1_scaffold_561_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11760..13514
DNA (1755bp) protein (585aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P930_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC17214.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_121_000G1_scaffold_561_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13637..14230
DNA (594bp) protein (198aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Phosphoesterase, MJ0936 family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6I4_9FIRM
phosphoesterase, MJ0936 family
L3_121_000G1_scaffold_561_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14206..15225
DNA (1020bp) protein (340aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PFC3_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC17216.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_121_000G1_scaffold_561_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15263..15796
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q5I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17217.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_121_000G1_scaffold_561_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15833..17404
DNA (1572bp) protein (524aa)
Aspartate oxidase (EC:1.3.99.1)
Aspartate oxidase {ECO:0000313|EMBL:CBL26843.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CBL26843.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Aspartate oxidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6I1_9FIRM
L3_121_000G1_scaffold_561_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17401..18078
DNA (678bp) protein (226aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P934_9FIRM
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:CDC17219.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_561_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18247..19113)
DNA (867bp) protein (289aa)
Transcriptional regulator n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6H9_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL26841.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_561_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19431..20696
DNA (1266bp) protein (422aa)
Anion transporter n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PFC7_9FIRM
Anion transporter {ECO:0000313|EMBL:CDC17221.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
anion transporter
L3_121_000G1_scaffold_561_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20803..21702
DNA (900bp) protein (300aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.32)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region {ECO:0000313|EMBL:CBL26839.1}; EC=4.2.1.32 {ECO:0000313|EMBL:CBL26839.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6H7_9FIRM
L3_121_000G1_scaffold_561_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21702..22328
DNA (627bp) protein (209aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.32)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region n=2 Tax=Clostridiales RepID=D4M6H6_9FIRM
Hydro-lyases Fe-S type tartrate/fumarate subfamily beta region {ECO:0000313|EMBL:CDC17223.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_561_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22555..23184)
DNA (630bp) protein (210aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Uracil phosphoribosyltransferase n=2 Tax=Clostridiales RepID=D4M6H5_9FIRM
L3_121_000G1_scaffold_561_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23451..24233
DNA (783bp) protein (261aa)
uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131, ECO:0000313|EMBL:CBL26836.1}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131, ECO:0000313|EMBL:CBL26836.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Uridine phosphorylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6H4_9FIRM
L3_121_000G1_scaffold_561_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24275..24694
DNA (420bp) protein (140aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PFD0_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CDC17226.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_000G1_scaffold_561_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24755..25741
DNA (987bp) protein (329aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:CBL26834.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CBL26834.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Adenosine deaminase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6H2_9FIRM
L3_121_000G1_scaffold_561_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25805..26617
DNA (813bp) protein (271aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYM2_9FIRM
L3_121_000G1_scaffold_561_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26690..27823
DNA (1134bp) protein (378aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P942_9FIRM
L3_121_000G1_scaffold_561_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27998..28585
DNA (588bp) protein (196aa)
Predicted hydrolases of HD superfamily n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1A7_9FIRM
Predicted hydrolases of HD superfamily {ECO:0000313|EMBL:CDC17230.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted hydrolases of HD superfamily
L3_121_000G1_scaffold_561_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28704..29711)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6G8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26830.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_561_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29793..31238)
DNA (1446bp) protein (482aa)
Carbon starvation protein, predicted membrane protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6G7_9FIRM
Carbon starvation protein, predicted membrane protein
Carbon starvation protein, predicted membrane protein {ECO:0000313|EMBL:CBL26829.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying items 1-30 of 60 in total

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