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L3_121_000G1_scaffold_3192

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_3192_1
unknown

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comp(1..75)
DNA (75bp) protein (25aa)
transcriptional regulator GltC
L3_121_000G1_scaffold_3192_2
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(118..819)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ET87_9FIRM
Transglutaminase-like enzymes, putative cysteine proteases
Transglutaminase-like enzymes, putative cysteine proteases {ECO:0000313|EMBL:CBL21308.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_121_000G1_scaffold_3192_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(809..1552)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0G283_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR48288.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_121_000G1_scaffold_3192_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1814..2686)
DNA (873bp) protein (291aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSA9_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC14090.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_121_000G1_scaffold_3192_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2942..3433)
DNA (492bp) protein (164aa)
HD domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZM7_9FIRM
HD domain.
HD domain {ECO:0000313|EMBL:CBL27237.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_3192_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3502..4194)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PWI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14092.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_121_000G1_scaffold_3192_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4293..5012
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZM6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27236.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_000G1_scaffold_3192_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5030..6634
DNA (1605bp) protein (535aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZM5_9FIRM
L3_121_000G1_scaffold_3192_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6764..7234)
DNA (471bp) protein (157aa)
Acetyltransferases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSB5_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CDC14095.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Acetyltransferases
L3_121_000G1_scaffold_3192_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7438..8664
DNA (1227bp) protein (409aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6G8_9FIRM
L3_121_000G1_scaffold_3192_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8789..10606)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PWI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14097.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Alcohol acetyltransferase.
L3_121_000G1_scaffold_3192_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10603..11553)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NPH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14098.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
alpha/beta hydrolase
L3_121_000G1_scaffold_3192_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11695..12843)
DNA (1149bp) protein (383aa)
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Isoaspartyl dipeptidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZM2_9FIRM
L3_121_000G1_scaffold_3192_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12876..14243)
DNA (1368bp) protein (456aa)
Short-chain fatty acids transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFQ0_9FIRM
Predicted membrane protein
Short-chain fatty acids transporter {ECO:0000313|EMBL:CDD76886.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Displaying 14 items

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