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L3_121_000G1_scaffold_2056

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_2056_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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3..2201
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27508.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_121_000G1_scaffold_2056_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2304..2771)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNX1_9FIRM
Small multidrug export protein {ECO:0000313|EMBL:KJF39440.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
small multi-drug export
L3_121_000G1_scaffold_2056_3
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2771..4306)
DNA (1536bp) protein (512aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJV5_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDA61059.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
epsM; protein involved in exopolysaccharide synthesis
L3_121_000G1_scaffold_2056_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4401..5384
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09171.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_121_000G1_scaffold_2056_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5539..5919
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XHY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99307.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
endoribonuclease L-PSP
L3_121_000G1_scaffold_2056_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6027..7052
DNA (1026bp) protein (342aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Clostridium sp. CAG:242 RepID=R6D2C4_9CLOT
Threonine aldolase {ECO:0000313|EMBL:CDA79239.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_121_000G1_scaffold_2056_7
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7800..8849
DNA (1050bp) protein (350aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CW79_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDA75766.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_121_000G1_scaffold_2056_8
unknown

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9531..10574
DNA (1044bp) protein (348aa)

This feature has no annotations

L3_121_000G1_scaffold_2056_9
unknown

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10894..12075
DNA (1182bp) protein (394aa)

This feature has no annotations

L3_121_000G1_scaffold_2056_10
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12719..13624
DNA (906bp) protein (302aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BCW4_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDA61050.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_121_000G1_scaffold_2056_11
unknown

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comp(13688..14362)
DNA (675bp) protein (225aa)

This feature has no annotations

L3_121_000G1_scaffold_2056_12
unknown

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14523..14981
DNA (459bp) protein (153aa)

This feature has no annotations

L3_121_000G1_scaffold_2056_13
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15073..15951)
DNA (879bp) protein (293aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LK83_9FIRM
L3_121_000G1_scaffold_2056_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16115..16603
DNA (489bp) protein (163aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6W0_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EDS12936.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_2056_15
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16769..17554
DNA (786bp) protein (262aa)
Endopeptidase Clp n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDZ7_9CLOT
Endopeptidase Clp {ECO:0000313|EMBL:CDA62448.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_121_000G1_scaffold_2056_16
unknown

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17551..17754
DNA (204bp) protein (68aa)

This feature has no annotations

L3_121_000G1_scaffold_2056_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17832..18713
DNA (882bp) protein (294aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6W7_9FIRM
L3_121_000G1_scaffold_2056_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18869..21469
DNA (2601bp) protein (867aa)
FtsK/SpoIIIE family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6W8_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EDS12943.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
cell division protein FtsK
L3_121_000G1_scaffold_2056_19
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21479..22450
DNA (972bp) protein (324aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DIW7_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDA77822.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
comA; competence-like protein
L3_121_000G1_scaffold_2056_20
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22447..22695
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GNU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY17399.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Protein of unknown function (DUF3006).
Displaying 20 items

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