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L3_121_000G1_scaffold_1738

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_1738_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(440..1105)
DNA (666bp) protein (222aa)
HD domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NY14_9FIRM
HD domain protein {ECO:0000313|EMBL:EDM99184.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
HD domain-containing protein
L3_121_000G1_scaffold_1738_2
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1406..3019
DNA (1614bp) protein (538aa)
cls; cardiolipin synthetase (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LK96_9FIRM
Cardiolipin synthase {ECO:0000313|EMBL:EOS59155.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_121_000G1_scaffold_1738_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3322..5646)
DNA (2325bp) protein (775aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LK48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59154.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_121_000G1_scaffold_1738_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5621..6520)
DNA (900bp) protein (300aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6X4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS12949.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC transporter ATP-binding protein
L3_121_000G1_scaffold_1738_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6486..6890)
DNA (405bp) protein (135aa)
Transcriptional regulator, GntR family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6X3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDS12948.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
GntR family transcriptional regulator
L3_121_000G1_scaffold_1738_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7196..8980
DNA (1785bp) protein (595aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
pyk; Pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6X1_9FIRM
L3_121_000G1_scaffold_1738_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8980..9894
DNA (915bp) protein (305aa)
Putative sortase, SrtB family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6X0_9FIRM
Putative sortase, SrtB family {ECO:0000313|EMBL:EDS12945.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
sortase
L3_121_000G1_scaffold_1738_8
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10030..10689)
DNA (660bp) protein (220aa)
REX family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002DAD759
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
rex; putative redox-sensing transcriptional regulator
L3_121_000G1_scaffold_1738_9
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10937..11362
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DJX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78172.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_121_000G1_scaffold_1738_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(11474..12208)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XZV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15254.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_121_000G1_scaffold_1738_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12303..14219)
DNA (1917bp) protein (639aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
thrS; Threonine-tRNA ligase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7G3_9FIRM
L3_121_000G1_scaffold_1738_12
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14900..16456
DNA (1557bp) protein (519aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rny; Ribonuclease Y (EC:3.1.-.-)
Ribonuclease Y n=1 Tax=Clostridium sp. CAG:169 RepID=R6BKA7_9CLOT
L3_121_000G1_scaffold_1738_13
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16717..18501
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59614.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Membrane proteins related to metalloendopeptidases
L3_121_000G1_scaffold_1738_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18825..20099)
DNA (1275bp) protein (425aa)
ATPase, AAA family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8Z7_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EDS12023.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
yrvN; putative AAA domain-containing protein YrvN
L3_121_000G1_scaffold_1738_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20132..20917)
DNA (786bp) protein (262aa)
Putative esterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0X0_9BACT
Putative esterase {ECO:0000313|EMBL:EXG86702.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
putative esterase
L3_121_000G1_scaffold_1738_16
unknown

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21263..21745
DNA (483bp) protein (161aa)

This feature has no annotations

L3_121_000G1_scaffold_1738_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21898..23586
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LRM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61425.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_121_000G1_scaffold_1738_18
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23657..24232)
DNA (576bp) protein (192aa)
Acetyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2Q2H5_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ERK30269.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
acetyltransferase
L3_121_000G1_scaffold_1738_19
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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24449..24907
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DLZ2_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EXJ23563.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
L3_121_000G1_scaffold_1738_20
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25055..25396)
DNA (342bp) protein (114aa)
Transcription regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVA2_CLOA9
abrB1; transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFS77199.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_121_000G1_scaffold_1738_21
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25541..26116
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63888.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
spmA; spore maturation protein A
L3_121_000G1_scaffold_1738_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26119..26646
DNA (528bp) protein (176aa)
Transporter gate domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8D0_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:EDS12176.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_1738_23
unknown

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comp(26526..26786)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 23 items

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