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L3_121_000G1_scaffold_3194

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_3194_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..134)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AAR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ57779.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_121_000G1_scaffold_3194_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(165..788)
DNA (624bp) protein (208aa)
Flavin reductase {ECO:0000313|EMBL:EEG54152.1}; EC=1.7.-.- {ECO:0000313|EMBL:EEG54152.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Flavin reductase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3D8_9CLOT
NADPH-dependent FMN reductase
L3_121_000G1_scaffold_3194_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1074..1718
DNA (645bp) protein (215aa)
Acetyltransferase, GNAT family n=2 Tax=Oscillibacter RepID=U2QFT8_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK64554.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Predicted acetyltransferase
L3_121_000G1_scaffold_3194_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1869..3293
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGC5_9FIRM
hypothetical protein
L3_121_000G1_scaffold_3194_5
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3297..3998
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NPN6_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ05788.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
srrA3; transcriptional regulatory protein SrrA
L3_121_000G1_scaffold_3194_6
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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4177..4902
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TB71_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN26668.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
L3_121_000G1_scaffold_3194_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5062..6003
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98489.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_121_000G1_scaffold_3194_8
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6088..6630)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KMQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68003.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Protein of unknown function (DUF1393).
L3_121_000G1_scaffold_3194_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6664..7797)
DNA (1134bp) protein (378aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N0A7_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDC04450.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_121_000G1_scaffold_3194_10
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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8016..9242
DNA (1227bp) protein (409aa)
Putative aldo/keto reductase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2U7_UNCMA
putative aldo/keto reductase
Putative aldo/keto reductase {ECO:0000313|EMBL:CAJ37296.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
L3_121_000G1_scaffold_3194_11
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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9432..9701
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PZ83_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL64118.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
hypothetical protein
L3_121_000G1_scaffold_3194_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9698..10270
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R792_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36478.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
type 11 methyltransferase
L3_121_000G1_scaffold_3194_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10246..11133
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RR45_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDS18303.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
type 11 methyltransferase
L3_121_000G1_scaffold_3194_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11130..12362
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AKJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46724.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_121_000G1_scaffold_3194_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12347..13138
DNA (792bp) protein (264aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N5D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18305.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
alpha/beta hydrolase
L3_121_000G1_scaffold_3194_16
unknown

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comp(13135..13224)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_121_000G1_scaffold_3194_17
unknown

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13300..14421
DNA (1122bp) protein (374aa)

This feature has no annotations

Displaying 17 items

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