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L3_121_000G1_scaffold_3347

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_3347_1
unknown

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comp(3..122)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_121_000G1_scaffold_3347_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(364..2148)
DNA (1785bp) protein (595aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CMI8_9FIRM
Creatinase {ECO:0000313|EMBL:ERI91709.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L3_121_000G1_scaffold_3347_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2332..3633
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63938.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_121_000G1_scaffold_3347_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3754..4728)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59218.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
RNA binding S1 domain-containing protein
L3_121_000G1_scaffold_3347_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5174..5959
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00036F863B
Polysaccharide deacetylase {ECO:0000313|EMBL:EEG30962.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
polysaccharide deacetylase
L3_121_000G1_scaffold_3347_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6048..7487
DNA (1440bp) protein (480aa)
pepA; leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMAP-Rule:MF_00181};; EC=3.4.11.10 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucyl aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Probable cytosol aminopeptidase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=AMPA_CLOPS
L3_121_000G1_scaffold_3347_7
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7567..8181)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DFL7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQB87028.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L3_121_000G1_scaffold_3347_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8310..8969
DNA (660bp) protein (220aa)
Channel protein, hemolysin III family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DKR0_CLOS4
Channel protein, hemolysin III family {ECO:0000313|EMBL:ERI97375.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hemolysin-like membrane protein
L3_121_000G1_scaffold_3347_9
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9242..9778)
DNA (537bp) protein (179aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PXW8_9FIRM
L3_121_000G1_scaffold_3347_10
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9919..10167)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J395_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28563.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Helix-turn-helix.
L3_121_000G1_scaffold_3347_11
unknown

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10280..10573
DNA (294bp) protein (98aa)

This feature has no annotations

L3_121_000G1_scaffold_3347_12
unknown

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10577..10873
DNA (297bp) protein (99aa)

This feature has no annotations

L3_121_000G1_scaffold_3347_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10965..11963)
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=root RepID=R5N1Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91237.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_121_000G1_scaffold_3347_14
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11981..12673)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DKR9_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI97385.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_121_000G1_scaffold_3347_15
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13097..13738
DNA (642bp) protein (214aa)
Protein translocase subunit SecA n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DUS4_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
protein translocase subunit secA
Displaying 15 items

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