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L3_121_000G1_scaffold_3773

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_3773_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1716)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C3W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78708.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cell wall-binding protein
L3_121_000G1_scaffold_3773_2
unknown

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comp(1725..1919)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_121_000G1_scaffold_3773_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2152..3228)
DNA (1077bp) protein (359aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Anaerotruncus colihominis DSM 17241 PF87_9FIRM">RepID=B0PF87_9FIRM
L3_121_000G1_scaffold_3773_4
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3258..4070)
DNA (813bp) protein (271aa)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDF6_9CLOT
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:CDA61260.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
HisJ family histidinol phosphate phosphatase
L3_121_000G1_scaffold_3773_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4303..4839
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EK03_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEQ58022.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
TDP-fucosamine acetyltransferase
L3_121_000G1_scaffold_3773_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4890..6719
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D4I1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79021.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
putative NAD(+) synthetase
L3_121_000G1_scaffold_3773_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6817..7089
DNA (273bp) protein (91aa)
UPF0237 protein ANACOL_00674 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7E3_9FIRM
UPF0237 protein ANACOL_00674 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ACT domain-containing protein
L3_121_000G1_scaffold_3773_8
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7108..8466
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF0984_00296 n=2 Tax=Firmicutes RepID=H1BIT9_9FIRM
UPF0210 protein HMPREF0863_02204 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L3_121_000G1_scaffold_3773_9
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8483..8971
DNA (489bp) protein (163aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWY4_CLOCD
ybaK/ebsC protein
L3_121_000G1_scaffold_3773_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9029..9724)
DNA (696bp) protein (232aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFY7_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sugar fermentation stimulation protein
L3_121_000G1_scaffold_3773_11
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10084..11166
DNA (1083bp) protein (361aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPZ8_9CLOT
L3_121_000G1_scaffold_3773_12
unknown

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comp(11757..11987)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 12 items

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