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L3_121_000M1_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 76 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000M1_scaffold_229_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1082..1648
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78527.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator
L3_121_000M1_scaffold_229_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1775..2920)
DNA (1146bp) protein (382aa)
lactaldehyde reductase (EC:1.1.1.77)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78528.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_121_000M1_scaffold_229_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3293..4519
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78529.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Chloride channel protein EriC
L3_121_000M1_scaffold_229_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4590..6209
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78530.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Mismatch repair ATPase (MutS family)
L3_121_000M1_scaffold_229_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6248..6940
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V534_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78531.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted transcriptional regulators
L3_121_000M1_scaffold_229_6
unknown

Not on your lists

7038..7370
DNA (333bp) protein (111aa)

This feature has no annotations

L3_121_000M1_scaffold_229_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7593..8522)
DNA (930bp) protein (310aa)
Predicted permeases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCR4_9FIRM
Predicted permeases {ECO:0000313|EMBL:CCZ78532.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted permeases
L3_121_000M1_scaffold_229_8
unknown

Not on your lists

8809..8937
DNA (129bp) protein (43aa)

This feature has no annotations

L3_121_000M1_scaffold_229_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8937..10562
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78533.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_121_000M1_scaffold_229_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10850..11815)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78534.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_121_000M1_scaffold_229_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12255..12671
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78535.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
protein of unknown function DUF4143
L3_121_000M1_scaffold_229_12
unknown

Not on your lists

12668..12814
DNA (147bp) protein (49aa)

This feature has no annotations

L3_121_000M1_scaffold_229_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12804..13298
DNA (495bp) protein (165aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Hydrolase NUDIX family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCR7_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ78537.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_121_000M1_scaffold_229_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13433..14488
DNA (1056bp) protein (352aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJU8_9FIRM
methyltransferase
L3_121_000M1_scaffold_229_15
unknown

Not on your lists

comp(14514..14891)
DNA (378bp) protein (126aa)

This feature has no annotations

L3_121_000M1_scaffold_229_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14965..16362
DNA (1398bp) protein (466aa)
Amino acid carrier protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US44_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CCZ78539.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
amino acid carrier protein
L3_121_000M1_scaffold_229_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16454..17005
DNA (552bp) protein (184aa)
UPF0397 protein BN518_02081 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKM3_9FIRM
UPF0397 protein BN518_02081 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_121_000M1_scaffold_229_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17012..18712
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V543_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78541.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter
L3_121_000M1_scaffold_229_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18712..19539
DNA (828bp) protein (276aa)
Putative cobalt ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCS0_9FIRM
Putative cobalt ABC transporter permease protein {ECO:0000313|EMBL:CCZ78542.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative cobalt ABC transporter permease
L3_121_000M1_scaffold_229_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19643..20146)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78543.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_121_000M1_scaffold_229_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20232..20750)
DNA (519bp) protein (173aa)
SCP-2 sterol transfer family n=1 Tax=Roseburia sp. CAG:18 RepID=R5US49_9FIRM
SCP-2 sterol transfer family {ECO:0000313|EMBL:CCZ78544.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
SCP-2 sterol transfer family.
L3_121_000M1_scaffold_229_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21196..22938
DNA (1743bp) protein (581aa)
SCP-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKM7_9FIRM
SCP-like protein {ECO:0000313|EMBL:CCZ78545.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_121_000M1_scaffold_229_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23030..24565)
DNA (1536bp) protein (512aa)
Sodium/proline symporter n=1 Tax=Roseburia sp. CAG:18 RepID=R5V548_9FIRM
Sodium/proline symporter {ECO:0000313|EMBL:CCZ78546.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sodium/proline symporter
L3_121_000M1_scaffold_229_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24860..25648
DNA (789bp) protein (263aa)
Xanthine permease n=2 Tax=Bacteria RepID=S6CQ30_9BACT
Putative permease {ECO:0000313|EMBL:EDM62315.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative xanthine permease
L3_121_000M1_scaffold_229_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25745..26629
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78548.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
integral membrane protein
L3_121_000M1_scaffold_229_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26626..27309
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78549.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two component system response regulator
L3_121_000M1_scaffold_229_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27312..28538
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two component system histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKN0_9FIRM
L3_121_000M1_scaffold_229_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28566..29018
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V553_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78551.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Membrane protein implicated in regulation of membrane protease activity
L3_121_000M1_scaffold_229_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29037..29960
DNA (924bp) protein (308aa)
Membrane protease subunits stomatin/prohibitin homologs n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCS8_9FIRM
Membrane protease subunits stomatin/prohibitin homologs {ECO:0000313|EMBL:CCZ78552.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_121_000M1_scaffold_229_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30131..32182
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78553.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
Displaying items 1-30 of 76 in total

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