ggKbase home page

L3_121_000M1_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 169 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000M1_scaffold_25_1
unknown

Not on your lists

1..246
DNA (246bp) protein (82aa)

This feature has no annotations

L3_121_000M1_scaffold_25_2
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(285..677)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PNY1_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
30S ribosomal protein S9
L3_121_000M1_scaffold_25_3
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(695..1132)
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P9H7_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
LSU ribosomal protein L13P
L3_121_000M1_scaffold_25_4
unknown

Not on your lists

comp(1110..1322)
DNA (213bp) protein (71aa)

This feature has no annotations

L3_121_000M1_scaffold_25_5
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1428..2183
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PH70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20144.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Predicted membrane protein
L3_121_000M1_scaffold_25_6
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2228..3973)
DNA (1746bp) protein (582aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P727_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC20143.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
ABC-type multidrug transport system, ATPase and permease components
L3_121_000M1_scaffold_25_7
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3970..5721)
DNA (1752bp) protein (584aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QDZ9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC20142.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
ABC-type multidrug transport system, ATPase and permease components
L3_121_000M1_scaffold_25_8
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5804..7417)
DNA (1614bp) protein (538aa)
Stage V sporulation protein B n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PNX6_9FIRM
Stage V sporulation protein B {ECO:0000313|EMBL:CDC20141.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Stage V sporulation protein B
L3_121_000M1_scaffold_25_9
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7445..9277)
DNA (1833bp) protein (611aa)
GTP-binding protein TypA/BipA n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P9H2_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CDC20140.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
GTP-binding protein TypA/BipA
L3_121_000M1_scaffold_25_10
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9547..11778
DNA (2232bp) protein (744aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
helicase, RecD/TraA family (EC:3.1.11.5)
Helicase RecD/TraA family n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PH66_9FIRM
L3_121_000M1_scaffold_25_11
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12520..13344
DNA (825bp) protein (275aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P724_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDC20138.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
family 3 extracellular solute-binding protein
L3_121_000M1_scaffold_25_12
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13433..14164
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PNX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20136.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
polar amino acid ABC transporter inner membrane subunit
L3_121_000M1_scaffold_25_13
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14154..14894
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PH62_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC20134.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
ABC transporter
L3_121_000M1_scaffold_25_14
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15031..15822
DNA (792bp) protein (264aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QDZ0_9FIRM
L3_121_000M1_scaffold_25_15
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16060..17064
DNA (1005bp) protein (335aa)
ABC transporter substrate binding protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PNW9_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:CDC20131.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
L3_121_000M1_scaffold_25_16
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17169..18089
DNA (921bp) protein (307aa)
ABC-type transporter integral membrane subunit n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PH58_9FIRM
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CDC20129.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
inner-membrane translocator
L3_121_000M1_scaffold_25_17
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18082..18876
DNA (795bp) protein (265aa)
ABC-type uncharacterized transport system ATPase component n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PNW7_9FIRM
ABC-type uncharacterized transport system ATPase component {ECO:0000313|EMBL:CDC20126.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
ABC-type uncharacterized transport system, ATPase component
L3_121_000M1_scaffold_25_18
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18982..19542
DNA (561bp) protein (187aa)
Putative FMN-dependent NADH-azoreductase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PH55_9FIRM
Putative FMN-dependent NADH-azoreductase {ECO:0000313|EMBL:CDC20124.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
acyl carrier protein phosphodiesterase
L3_121_000M1_scaffold_25_19
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19603..20310
DNA (708bp) protein (236aa)
Cell division protein DivIB n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QDY2_9FIRM
Cell division protein DivIB {ECO:0000313|EMBL:CDC20122.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
cell division protein FtsQ
L3_121_000M1_scaffold_25_20
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20590..21714
DNA (1125bp) protein (375aa)
Cell division protein FtsZ n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P9F5_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
ftsZ; cell division protein FtsZ
L3_121_000M1_scaffold_25_21
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21868..22371)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P705_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20118.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
CarD-like protein
L3_121_000M1_scaffold_25_22
Selenomonas infelix, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23409..23774
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Selenomonas infelix ATCC 43532 RepID=G5GQT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHG20718.1}; TaxID=679201 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas infelix ATCC 43532.;"
transposase
L3_121_000M1_scaffold_25_23
unknown

Not on your lists

comp(24042..24185)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_121_000M1_scaffold_25_24
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24564..25301)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PNV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20116.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Transglutaminase-like superfamily.
L3_121_000M1_scaffold_25_25
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25490..26056
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P9F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20115.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L3_121_000M1_scaffold_25_26
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26686..27492)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P6Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20113.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
L3_121_000M1_scaffold_25_27
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27641..28579)
DNA (939bp) protein (313aa)
Copper amine oxidase domain protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PNV4_9FIRM
Copper amine oxidase domain protein {ECO:0000313|EMBL:CDC20111.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
L3_121_000M1_scaffold_25_28
unknown

Not on your lists

comp(28521..28658)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_121_000M1_scaffold_25_29
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28669..30012)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PH42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20109.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
MATE efflux family protein
L3_121_000M1_scaffold_25_30
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30174..30638)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QDX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20107.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
Displaying items 1-30 of 169 in total

View Taxonomy