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L3_121_243G1_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_58_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(80..619)
DNA (540bp) protein (180aa)
Rubrerythrin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W1_9ACTN
Rubrerythrin {ECO:0000313|EMBL:EBA39629.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rubrerythrin
L3_121_243G1_scaffold_58_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(734..1639)
DNA (906bp) protein (302aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
Base excision DNA repair protein, HhH-GPD family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W2_9ACTN
Base excision DNA repair protein, HhH-GPD family {ECO:0000313|EMBL:EBA39630.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_121_243G1_scaffold_58_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1661..2146)
DNA (486bp) protein (162aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Collinsella RepID=A4E9W3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71753.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
asnc family transcriptional regulator
L3_121_243G1_scaffold_58_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2981..3448)
DNA (468bp) protein (156aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphodiesterase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBE7_9ACTN
phosphodiesterase, MJ0936 family
L3_121_243G1_scaffold_58_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3543..4247)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA39633.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LytTR family two component transcriptional regulator
L3_121_243G1_scaffold_58_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4332..5675)
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Collinsella RepID=A4E9W6_9ACTN
signal transduction histidine kinase LytS
L3_121_243G1_scaffold_58_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5672..6859)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71749.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_121_243G1_scaffold_58_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7031..8290)
DNA (1260bp) protein (420aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W8_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA39636.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_121_243G1_scaffold_58_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8392..9336)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39637.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_121_243G1_scaffold_58_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9429..10163)
DNA (735bp) protein (245aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAQ9_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA35925.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LytTR family two component transcriptional regulator
L3_121_243G1_scaffold_58_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10202..11593)
DNA (1392bp) protein (464aa)
signal transduction histidine kinase LytS (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH67_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA35924.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_121_243G1_scaffold_58_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11705..12982)
DNA (1278bp) protein (426aa)
Amidohydrolase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8A5_9ACTN
Amidohydrolase family protein {ECO:0000313|EMBL:CDA35923.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amidohydrolase
L3_121_243G1_scaffold_58_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13113..14564)
DNA (1452bp) protein (484aa)
Amino acid permease n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X3_9ACTN
Amino acid permease {ECO:0000313|EMBL:EBA39641.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid permease-associated protein
L3_121_243G1_scaffold_58_14
unknown

Not on your lists

comp(14633..15205)
DNA (573bp) protein (191aa)

This feature has no annotations

L3_121_243G1_scaffold_58_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15350..15958
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71742.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_121_243G1_scaffold_58_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16159..17121)
DNA (963bp) protein (321aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=2 Tax=Collinsella RepID=A4E9X5_9ACTN
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_121_243G1_scaffold_58_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17808..21347)
DNA (3540bp) protein (1180aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X8_9ACTN
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_121_243G1_scaffold_58_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21798..22736)
DNA (939bp) protein (313aa)
FHA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF30_9ACTN
FHA domain protein {ECO:0000313|EMBL:CDA35184.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_121_243G1_scaffold_58_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22741..24582)
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71734.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
serine/threonine protein kinase
L3_121_243G1_scaffold_58_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24579..25460)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1X7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71733.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
type III fibronectin
L3_121_243G1_scaffold_58_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25704..26300)
DNA (597bp) protein (199aa)
Recombination protein RecR n=2 Tax=Collinsella RepID=A4E9Y2_9ACTN
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA replication and repair protein RecR
L3_121_243G1_scaffold_58_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26314..26634)
DNA (321bp) protein (107aa)
Nucleoid-associated protein COLAER_01238 n=2 Tax=Collinsella RepID=A4E9Y3_9ACTN
Nucleoid-associated protein COLAER_01238 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_121_243G1_scaffold_58_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26858..29359)
DNA (2502bp) protein (834aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EBA39653.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EBA39653.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y5_9ACTN
L3_121_243G1_scaffold_58_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29475..30200
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39654.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_121_243G1_scaffold_58_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30345..32198
DNA (1854bp) protein (618aa)
Kinase domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y7_9ACTN
Kinase domain protein {ECO:0000313|EMBL:EBA39655.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
serine/threonine protein kinase
L3_121_243G1_scaffold_58_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32195..33208
DNA (1014bp) protein (338aa)
FHA domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71726.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FHA domain-containing protein
L3_121_243G1_scaffold_58_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33215..33631
DNA (417bp) protein (139aa)
FHA domain protein n=2 Tax=Collinsella RepID=A4E9Y9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71725.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FHA domain-containing protein
L3_121_243G1_scaffold_58_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33628..35562
DNA (1935bp) protein (645aa)
protein serine/threonine phosphatase (EC:3.1.3.16)
Protein phosphatase 2C n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Z0_9ACTN
Protein phosphatase 2C {ECO:0000313|EMBL:EBA39658.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_121_243G1_scaffold_58_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35579..38449
DNA (2871bp) protein (957aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Z1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71723.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_121_243G1_scaffold_58_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38582..40525
DNA (1944bp) protein (648aa)
Kinase domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGH5_9ACTN
Kinase domain protein {ECO:0000313|EMBL:CDA35649.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
serine/threonine protein kinase
Displaying items 1-30 of 221 in total

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