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L3_121_243G1_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_86_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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102..1016
DNA (915bp) protein (305aa)
putative muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6IBB6_9BACE
LD-carboxypeptidase family protein {ECO:0000313|EMBL:EXY63696.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L3_121_243G1_scaffold_86_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1073..2077
DNA (1005bp) protein (335aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E1WQ24_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY89645.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_121_243G1_scaffold_86_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2087..2515
DNA (429bp) protein (143aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=Q64N58_BACFR
sufE; putative SufE Fe/S-cluster-related protein
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:EXY88422.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_121_243G1_scaffold_86_4
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2643..2870)
DNA (228bp) protein (76aa)
Transcriptional regulator n=15 Tax=Bacteroides RepID=Q64N57_BACFR
putative DNA-binding protein
Transcriptional regulator {ECO:0000313|EMBL:CCZ39774.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
L3_121_243G1_scaffold_86_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2899..3537)
DNA (639bp) protein (213aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64N56_BACFR
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:BAD51081.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_121_243G1_scaffold_86_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3573..4361)
DNA (789bp) protein (263aa)
CAAX amino terminal protease family protein n=2 Tax=Bacteroides RepID=D1JVK0_9BACE
CAAX protease self-immunity family protein {ECO:0000313|EMBL:EYA37009.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
putative transmembrane CAAX amino terminal protease family
L3_121_243G1_scaffold_86_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5275..6216)
DNA (942bp) protein (314aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Putative riboflavin kinase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64N53_BACFR
putative riboflavin kinase
L3_121_243G1_scaffold_86_8
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6236..6859)
DNA (624bp) protein (208aa)
HAD hydrolase, family IA n=11 Tax=Bacteroides RepID=C6IBA8_9BACE
haloacid dehalogenase
Putative haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:CDD40220.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_121_243G1_scaffold_86_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6840..6980)
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6IBA7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY42491.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_121_243G1_scaffold_86_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6977..9661)
DNA (2685bp) protein (895aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EXY82419.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EXY82419.1};; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
putative transmembrane calcium-transporting ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=4 Tax=Bacteroides RepID=D1JVJ5_9BACE
L3_121_243G1_scaffold_86_11
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9725..11398)
DNA (1674bp) protein (558aa)
Two-component system sensor histidine kinase n=9 Tax=Bacteroides RepID=Q64N50_BACFR
putative two-component system sensor kinase/response regulator fusion protein
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CDD40211.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_121_243G1_scaffold_86_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11533..11694
DNA (162bp) protein (54aa)
Rubredoxin n=8 Tax=Bacteroides RepID=E1WQM8_BACF6
rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L3_121_243G1_scaffold_86_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11772..13469)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C6IBA3_9BACE
putative transmembrane Na+/Pi-cotransporter
Na+/Pi-cotransporter family protein {ECO:0000313|EMBL:EXZ51870.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_121_243G1_scaffold_86_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13553..15226
DNA (1674bp) protein (558aa)
Uridine kinase n=14 Tax=Bacteroides RepID=Q64N47_BACFR
putative phosphoribulose/uridine kinase
Phosphoribulokinase / Uridine kinase family protein {ECO:0000313|EMBL:EXY88443.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_121_243G1_scaffold_86_15
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15409..15507
DNA (99bp) protein (33aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=I0PYN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD40203.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_121_243G1_scaffold_86_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15464..17017
DNA (1554bp) protein (518aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=K1FYL5_BACFG
putative two-component regulator sensor histidine kinase transcriptional regulator
L3_121_243G1_scaffold_86_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17243..19069)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64N45_BACFR
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:EXZ76445.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
hypothetical protein
L3_121_243G1_scaffold_86_18
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19460..21046)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JVI7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ24236.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
conserved hypothetical exported protein, possible ATP/GTP-binding
L3_121_243G1_scaffold_86_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21064..23001)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FJR1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA79466.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
hypothetical protein
L3_121_243G1_scaffold_86_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23402..23863)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9B091_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY93275.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L3_121_243G1_scaffold_86_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24446..25819)
DNA (1374bp) protein (458aa)
Peptidase, M24 family n=7 Tax=Bacteroides RepID=D1JVI4_9BACE
putative aminopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EIY42479.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_121_243G1_scaffold_86_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26084..27562
DNA (1479bp) protein (493aa)
RNA polymerase sigma-54 factor n=8 Tax=Bacteroides RepID=D1JVI2_9BACE
putative RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EXZ51880.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_121_243G1_scaffold_86_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27592..28272
DNA (681bp) protein (227aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=E4W1L8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EFR55483.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
putative transmembrane protein
L3_121_243G1_scaffold_86_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28303..28683
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=4 Tax=Bacteroides RepID=E4W1L7_BACFG
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
putative glycine cleavage system H protein
L3_121_243G1_scaffold_86_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28860..29366
DNA (507bp) protein (169aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=4 Tax=Bacteroides RepID=E4W1L6_BACFG
phosphoribosylaminoimidazole carboxylase
L3_121_243G1_scaffold_86_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29489..31333
DNA (1845bp) protein (615aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GXJ4_BACFG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_121_243G1_scaffold_86_27
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31562..32335)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LVA1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN03216.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
L3_121_243G1_scaffold_86_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32348..34069)
DNA (1722bp) protein (574aa)
Putative endo-1,4-beta-xylanase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64N32_BACFR
putative endo-1,4-beta-xylanase
Glycosyl hydrolases 43 family protein {ECO:0000313|EMBL:EXY88426.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_121_243G1_scaffold_86_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34091..35383)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64N31_BACFR
hypothetical protein
Glucoamylase family protein {ECO:0000313|EMBL:EYE42710.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_121_243G1_scaffold_86_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35618..37138)
DNA (1521bp) protein (507aa)
SusD family protein n=9 Tax=Bacteroides RepID=D1JVH4_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXZ85408.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
putative outer membrane protein
Displaying items 1-30 of 72 in total

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