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L3_121_243G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_144_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(288..911)
DNA (624bp) protein (208aa)
Transport protein n=11 Tax=Bifidobacterium RepID=F8ARV8_BIFLN
transporter
Uncharacterized protein {ECO:0000313|EMBL:EEQ54136.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_121_243G1_scaffold_144_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1021..2274
DNA (1254bp) protein (418aa)
Beta-eliminating lyase family protein {ECO:0000313|EMBL:CCK34552.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CCK34552.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Threonine aldolase n=4 Tax=Bifidobacterium longum RepID=B3DT34_BIFLD
gly1; gly1
L3_121_243G1_scaffold_144_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2421..3581)
DNA (1161bp) protein (387aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EIJ22101.1}; EC=2.4.-.- {ECO:0000313|EMBL:EIJ22101.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glycosyltransferase, group 1 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASK8_BIFLN
rfaG2; rfag2
L3_121_243G1_scaffold_144_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3648..5123
DNA (1476bp) protein (492aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AVC3_BIFLN
phosphoribosylglycinamide formyltransferase
L3_121_243G1_scaffold_144_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5308..5430
DNA (123bp) protein (41aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=V6XZY4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32273.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_121_243G1_scaffold_144_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5516..6268
DNA (753bp) protein (251aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:CBK70823.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:CBK70823.1};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=18 Tax=Bacteria RepID=PUR7_BIFLD
phosphoribosylaminoimidazolesuccinocarboxamide synthase
L3_121_243G1_scaffold_144_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6331..10065
DNA (3735bp) protein (1245aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CBK70824.1}; EC=6.3.5.3 {ECO:0000313|EMBL:CBK70824.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phosphoribosylformylglycinamidine synthase n=4 Tax=Bifidobacterium longum RepID=D6D9H1_BIFLN
purL; purl
L3_121_243G1_scaffold_144_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10203..11501
DNA (1299bp) protein (433aa)
Esterase/lipase n=11 Tax=Bifidobacterium RepID=B3DT39_BIFLD
lipase/esterase
Esterase {ECO:0000313|EMBL:KEY32528.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_121_243G1_scaffold_144_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11474..12844
DNA (1371bp) protein (457aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=B3DT40_BIFLD
hypothetical protein
Alcohol acetyltransferase {ECO:0000313|EMBL:AIW43493.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_121_243G1_scaffold_144_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12841..13500
DNA (660bp) protein (220aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=C5E802_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95163.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_121_243G1_scaffold_144_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13514..15028)
DNA (1515bp) protein (505aa)
Transporter, NhaC family (TC 2.A.35) n=9 Tax=Bifidobacterium RepID=D6D9H4_BIFLN
nhaC; nhac
Possible Na(+)/H(+) antiporter {ECO:0000313|EMBL:CCY95164.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_121_243G1_scaffold_144_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15117..15644
DNA (528bp) protein (176aa)
Fhu operon transcription regulator n=4 Tax=Bifidobacterium longum RepID=B3DT45_BIFLD
fhuR2; fhu operon transcriptional regulator
Fhu operon transcription regulator {ECO:0000313|EMBL:ACD98314.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_121_243G1_scaffold_144_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15751..16728
DNA (978bp) protein (326aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=13 Tax=Bifidobacterium RepID=D6D9H6_BIFLN
hypothetical protein
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEQ54152.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_121_243G1_scaffold_144_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16762..16980)
DNA (219bp) protein (73aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=V6XV04_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81139.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_121_243G1_scaffold_144_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16977..18566)
DNA (1590bp) protein (530aa)
Nucleotidyltransferase/DNA polymerase for DNA repair n=3 Tax=Bifidobacterium RepID=B3DT48_BIFLD
Nucleotidyltransferase/DNA polymerase for DNA repair {ECO:0000313|EMBL:ACD98317.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
dinP1; Nucleotidyltransferase/DNA polymerase for DNA repair
L3_121_243G1_scaffold_144_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18731..20233
DNA (1503bp) protein (501aa)
S-adenosyl-L-homocysteine hydrolase family protein {ECO:0000313|EMBL:CCK34538.1}; EC=3.3.1.1 {ECO:0000313|EMBL:CCK34538.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
S-adenosyl-L-homocysteine hydrolase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0L1_BIFLN
ahcY; S-adenosyl-L-homocysteine hydrolase
L3_121_243G1_scaffold_144_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20273..21646
DNA (1374bp) protein (458aa)
Cytosine deaminase n=17 Tax=Bifidobacterium RepID=B3DT50_BIFLD
chlorohydrolase
Possible chlorohydrolase-like protein {ECO:0000313|EMBL:AAN24923.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_121_243G1_scaffold_144_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21716..22186
DNA (471bp) protein (157aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G599_BIFLO
hypothetical protein
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:EIJ22380.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_121_243G1_scaffold_144_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22388..23251
DNA (864bp) protein (288aa)
Bacterial extracellular solute-binding s, 3 family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I047_BIFLN
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:CCK34535.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hisJ4; amino acid ABC transporter/signal transduction systems periplasmic protein
L3_121_243G1_scaffold_144_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23361..24248
DNA (888bp) protein (296aa)
Permease of the ABC transporter n=5 Tax=Bifidobacterium RepID=V6XZX2_BIFLN
amino acid ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY23242.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_121_243G1_scaffold_144_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24245..25030
DNA (786bp) protein (262aa)
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) n=15 Tax=Bifidobacterium RepID=D6D9I2_BIFLN
amino acid ABC transporter ATP-binding protein
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY23243.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_121_243G1_scaffold_144_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25434..26945
DNA (1512bp) protein (504aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Amidophosphoribosyltransferase n=20 Tax=Bifidobacterium RepID=E4QZR7_BIFLM
amidophosphoribosyltransferase
L3_121_243G1_scaffold_144_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27065..28102
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=5 Tax=Bifidobacterium longum RepID=D6D9I3_BIFLN
purM; purm
L3_121_243G1_scaffold_144_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28129..29397
DNA (1269bp) protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Phosphoribosylamine--glycine ligase n=16 Tax=Bifidobacterium RepID=B3DT57_BIFLD
purD; purd
L3_121_243G1_scaffold_144_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29771..31408)
DNA (1638bp) protein (546aa)
Aldehyde dehydrogenase n=7 Tax=Bifidobacterium RepID=E8MHA4_BIFL2
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_121_243G1_scaffold_144_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31529..33604)
DNA (2076bp) protein (692aa)
Arylsulfatase {ECO:0000313|EMBL:EEI81151.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEI81151.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
MdoB1 n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4QZS1_BIFLM
mdoB1; mdob1
L3_121_243G1_scaffold_144_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33865..34788)
DNA (924bp) protein (308aa)
Periplasmic solute binding family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZW9_BIFLN
Periplasmic solute binding family protein {ECO:0000313|EMBL:CCK34527.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L3_121_243G1_scaffold_144_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34920..35075
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E823_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54167.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
ABC transporter
L3_121_243G1_scaffold_144_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35050..35265
DNA (216bp) protein (72aa)
Protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I243_BIFLN
Protein {ECO:0000313|EMBL:CCK34526.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L3_121_243G1_scaffold_144_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35300..35728)
DNA (429bp) protein (143aa)
Fe2+/Zn2+ uptake regulation protein n=18 Tax=Bifidobacterium RepID=B3DT62_BIFLD
metal uptake regulator
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:ACD98331.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying items 1-30 of 61 in total

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