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L3_121_243G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_152_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..338
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y723_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08992.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_121_243G1_scaffold_152_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

407..1471
DNA (1065bp) protein (355aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WW54_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD13525.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation efflux system protein
L3_121_243G1_scaffold_152_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1533..4616
DNA (3084bp) protein (1028aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCR3_9PORP
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EDN85516.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
cation efflux system protein
L3_121_243G1_scaffold_152_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4629..6116
DNA (1488bp) protein (496aa)
Outer membrane efflux protein n=4 Tax=Parabacteroides RepID=A7AIE7_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:CDD13527.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
outer membrane protein TolC
L3_121_243G1_scaffold_152_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6130..8343
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BQ67_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08988.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
drug efflux protein
L3_121_243G1_scaffold_152_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8343..9398
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQH3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88581.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
drug efflux protein
L3_121_243G1_scaffold_152_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9728..11554
DNA (1827bp) protein (609aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7A9I9_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN88579.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_243G1_scaffold_152_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11631..13460)
DNA (1830bp) protein (610aa)
Heparinase II/III-like protein n=2 Tax=Parabacteroides merdae RepID=A7A9I8_9PORP
Heparinase II/III-like protein {ECO:0000313|EMBL:EDN88578.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Heparinase II/III-like protein.
L3_121_243G1_scaffold_152_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13839..17057
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Carbamoyl-phosphate synthase, large subunit n=2 Tax=Parabacteroides RepID=K5ZCQ8_9PORP
glutamine-dependent carbamyl phosphate synthetase
L3_121_243G1_scaffold_152_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17135..19192
DNA (2058bp) protein (686aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9I5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88575.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_243G1_scaffold_152_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19391..20764
DNA (1374bp) protein (458aa)
Tat pathway signal sequence domain protein n=2 Tax=Parabacteroides merdae RepID=A7A9I4_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN88574.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_243G1_scaffold_152_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20858..22021)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7A9I3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13534.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_243G1_scaffold_152_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23019..24143)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCQ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08980.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
iron(III) ABC transporter periplasmic iron-binding protein
L3_121_243G1_scaffold_152_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24146..25552)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0F3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08979.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_121_243G1_scaffold_152_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25573..27588)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZZX5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08978.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
vitamin B12 receptor
L3_121_243G1_scaffold_152_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28168..29685
DNA (1518bp) protein (506aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=2 Tax=Parabacteroides merdae RepID=A7A9H5_9PORP
L3_121_243G1_scaffold_152_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29693..29926
DNA (234bp) protein (78aa)
ATP synthase F1, epsilon subunit n=2 Tax=Parabacteroides RepID=K5ZC52_9PORP
ATP synthase F1, epsilon subunit {ECO:0000313|EMBL:EKN08976.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ATP synthase subunit epsilon
L3_121_243G1_scaffold_152_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29942..30370
DNA (429bp) protein (143aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7A9H3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14622.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_243G1_scaffold_152_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30348..31406
DNA (1059bp) protein (353aa)
ATP synthase subunit a n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0E8_9PORP
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ATP synthase subunit A
L3_121_243G1_scaffold_152_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31442..31696
DNA (255bp) protein (85aa)
ATP synthase F0, C subunit n=7 Tax=Parabacteroides RepID=A7A9H1_9PORP
ATP synthase subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_243G1_scaffold_152_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31710..32210
DNA (501bp) protein (167aa)
ATP synthase subunit b n=4 Tax=Parabacteroides RepID=A7A9H0_9PORP
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATP synthase subunit B
L3_121_243G1_scaffold_152_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32214..32756
DNA (543bp) protein (181aa)
ATP synthase subunit delta n=3 Tax=Parabacteroides RepID=A7A9G9_9PORP
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
F0F1 ATP synthase subunit delta
L3_121_243G1_scaffold_152_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32771..34351
DNA (1581bp) protein (527aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=2 Tax=Parabacteroides merdae RepID=A7A9G8_9PORP
L3_121_243G1_scaffold_152_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34404..35261
DNA (858bp) protein (286aa)
ATP synthase gamma chain n=2 Tax=Parabacteroides merdae RepID=A7A9G7_9PORP
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
F0F1 ATP synthase subunit gamma
L3_121_243G1_scaffold_152_25
unknown

Not on your lists

comp(35798..35965)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_121_243G1_scaffold_152_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36026..38233
DNA (2208bp) protein (736aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y600_9PORP
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDD13862.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_243G1_scaffold_152_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38338..38838
DNA (501bp) protein (167aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=4 Tax=Parabacteroides RepID=A7A9G5_9PORP
L3_121_243G1_scaffold_152_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38877..40226)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7A9G4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08964.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_121_243G1_scaffold_152_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40381..41913)
DNA (1533bp) protein (511aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Carboxyl transferase domain protein n=2 Tax=Parabacteroides RepID=A7A9G3_9PORP
Carboxyl transferase domain protein {ECO:0000313|EMBL:CDD13865.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_243G1_scaffold_152_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41891..42430)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Y6Z6_9PORP
Biotin-requiring enzyme {ECO:0000313|EMBL:CDD13866.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
biotin/lipoyl attachment domain-containing protein
Displaying items 1-30 of 46 in total

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