ggKbase home page

L3_121_243G1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_175_1
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(181..804)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IH75_9BACE
acetyl transferase
Uncharacterized protein {ECO:0000313|EMBL:EES70823.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_121_243G1_scaffold_175_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(786..1700)
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IH74_9BACE
hypothetical protein
Putative capsule-related protein {ECO:0000313|EMBL:AAO75629.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_243G1_scaffold_175_3
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1716..2876)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IH73_9BACE
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AAO75630.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_243G1_scaffold_175_4
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2889..3254)
DNA (366bp) protein (122aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6IH72_9BACE
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS02636.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_121_243G1_scaffold_175_5
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3251..3391)
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I0PZZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE78118.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_121_243G1_scaffold_175_6
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3496..5955)
DNA (2460bp) protein (820aa)
Outer membrane protein n=2 Tax=Bacteroides RepID=Q8AAE0_BACTN
Outer membrane protein {ECO:0000313|EMBL:AAO75632.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
L3_121_243G1_scaffold_175_7
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6171..7211)
DNA (1041bp) protein (347aa)
L-asparaginase I n=2 Tax=Bacteroides RepID=Q8AAD9_BACTN
L-asparaginase I
L-asparaginase, type I {ECO:0000313|EMBL:EES70818.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_121_243G1_scaffold_175_8
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7477..8247)
DNA (771bp) protein (257aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Tryptophan synthase alpha chain n=3 Tax=Bacteroides RepID=TRPA_BACTN
L3_121_243G1_scaffold_175_9
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8266..8889)
DNA (624bp) protein (208aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
N-(5'-phosphoribosyl)anthranilate isomerase n=3 Tax=Bacteroides RepID=Q8AAD7_BACTN
N-(5'-phosphoribosyl)anthranilate isomerase
L3_121_243G1_scaffold_175_10
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8920..9702)
DNA (783bp) protein (261aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Indole-3-glycerol phosphate synthase n=3 Tax=Bacteroides RepID=TRPC_BACTN
trpC; indole-3-glycerol phosphate synthase
L3_121_243G1_scaffold_175_11
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9781..10779)
DNA (999bp) protein (333aa)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Anthranilate phosphoribosyltransferase n=4 Tax=Bacteroides RepID=TRPD_BACTN
anthranilate phosphoribosyltransferase
L3_121_243G1_scaffold_175_12
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10784..11350)
DNA (567bp) protein (189aa)
Anthranilate synthase component II n=5 Tax=Bacteroides RepID=Q8AAD4_BACTN
anthranilate synthase component II
Anthranilate synthase component II {ECO:0000313|EMBL:EFI02850.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_121_243G1_scaffold_175_13
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11419..12825)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IH64_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES70812.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
anthranilate synthase component I
L3_121_243G1_scaffold_175_14
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12870..14054)
DNA (1185bp) protein (395aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000255|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00133};; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Tryptophan synthase beta chain n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=TRPB_BACTN
L3_121_243G1_scaffold_175_15
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14413..14553
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I0Q000_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS02647.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L3_121_243G1_scaffold_175_16
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14631..15776
DNA (1146bp) protein (382aa)
Iron-containing alcohol dehydrogenase n=4 Tax=Bacteroides RepID=Q8AAD0_BACTN
iron-containing alcohol dehydrogenase
NADP-dependent alcohol dehydrogenase {ECO:0000313|EMBL:EOS02648.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_121_243G1_scaffold_175_17
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15949..17571)
DNA (1623bp) protein (541aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS domain S-box protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HFI3_BACT4
L3_121_243G1_scaffold_175_18
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17917..19776
DNA (1860bp) protein (620aa)
Putative Na+/sulphate transporter n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8AAC6_BACTN
Na+/sulfate transporter
Putative Na+/sulphate transporter {ECO:0000313|EMBL:AAO75646.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_243G1_scaffold_175_19
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20543..21469)
DNA (927bp) protein (309aa)
Exopolyphosphatase n=2 Tax=Bacteroides RepID=D7II64_9BACE
Exopolyphosphatase {ECO:0000313|EMBL:EFI02856.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
exopolyphosphatase
L3_121_243G1_scaffold_175_20
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21466..23583)
DNA (2118bp) protein (706aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Polyphosphate kinase n=2 Tax=Bacteroides RepID=Q8AAC4_BACTN
L3_121_243G1_scaffold_175_21
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23756..24334
DNA (579bp) protein (193aa)
tRNA/rRNA methyltransferase, SpoU-like protein n=4 Tax=Bacteroides RepID=Q8AAC3_BACTN
hypothetical protein
tRNA/rRNA methyltransferase, SpoU-like protein {ECO:0000313|EMBL:AAO75649.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_243G1_scaffold_175_22
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24456..26645)
DNA (2190bp) protein (730aa)
Glutamine synthetase n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HFI8_BACT4
Glutamine synthetase {ECO:0000313|EMBL:EOS02654.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
glutamine synthetase
L3_121_243G1_scaffold_175_23
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26701..28158)
DNA (1458bp) protein (486aa)
Ammonium transporter n=3 Tax=Bacteroides RepID=Q8AAC1_BACTN
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_243G1_scaffold_175_24
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28234..28590)
DNA (357bp) protein (119aa)
Nitrogen regulatory protein P-II n=4 Tax=Bacteroides RepID=Q8AAC0_BACTN
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EFI02882.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_121_243G1_scaffold_175_25
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28742..29467)
DNA (726bp) protein (242aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8AAB9_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02657.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_121_243G1_scaffold_175_26
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29542..30774)
DNA (1233bp) protein (411aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
LL-diaminopimelate aminotransferase n=2 Tax=Bacteroides RepID=DAPAT_BACTN
L,L-diaminopimelate aminotransferase
L3_121_243G1_scaffold_175_27
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30832..31635)
DNA (804bp) protein (268aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Diaminopimelate epimerase n=3 Tax=Bacteroides RepID=DAPF_BACTN
dapF; diaminopimelate epimerase
L3_121_243G1_scaffold_175_28
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32045..32341
DNA (297bp) protein (99aa)
Thioredoxin n=3 Tax=Bacteroides RepID=D7II94_9BACE
thioredoxin
Uncharacterized protein {ECO:0000313|EMBL:EOS02660.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_121_243G1_scaffold_175_29
unknown

Not on your lists

32397..32510
DNA (114bp) protein (38aa)

This feature has no annotations

L3_121_243G1_scaffold_175_30
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32467..33204)
DNA (738bp) protein (246aa)
Putative glycerophosphodiester phosphodiesterase n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8AAB5_BACTN
glycerophosphodiester phosphodiesterase
Putative glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:AAO75657.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Displaying items 1-30 of 53 in total

View Taxonomy