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L3_121_243G1_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_188_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(83..535)
DNA (453bp) protein (151aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3B1_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD13604.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative metal transport-related, exported protein
L3_121_243G1_scaffold_188_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(619..4422)
DNA (3804bp) protein (1268aa)
CzcA family heavy metal efflux pump n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWG5_9PORP
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKN15796.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
copper/silver resistance-related transport membrane protein
L3_121_243G1_scaffold_188_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4695..5294
DNA (600bp) protein (200aa)
Resolvase, N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AGB5_9PORP
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDN86171.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
serine type site-specific recombinase
L3_121_243G1_scaffold_188_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5291..6373)
DNA (1083bp) protein (361aa)
Magnesium and cobalt transport protein CorA n=2 Tax=Parabacteroides merdae RepID=A7AGB6_9PORP
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Mg2+/Co2+ transport protein
L3_121_243G1_scaffold_188_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6386..8863)
DNA (2478bp) protein (826aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Endonuclease MutS2 n=2 Tax=Parabacteroides merdae RepID=A7AGB7_9PORP
DNA mismatch repair protein MutS
L3_121_243G1_scaffold_188_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8879..10297)
DNA (1419bp) protein (473aa)
PDZ/DHR/GLGF domain protein n=2 Tax=Parabacteroides merdae RepID=A7AGB8_9PORP
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:EDN86174.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
PDZ domain-containing protein
L3_121_243G1_scaffold_188_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10543..11136
DNA (594bp) protein (198aa)
Protein GrpE n=2 Tax=Parabacteroides merdae RepID=A7AGB9_9PORP
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
molecular chaperon GrpE protein
L3_121_243G1_scaffold_188_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11179..12336
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=2 Tax=Parabacteroides merdae RepID=A7AGC0_9PORP
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
chaperone protein DnaJ
L3_121_243G1_scaffold_188_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12809..14425
DNA (1617bp) protein (539aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQM0_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD13593.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter ATP-binding protein
L3_121_243G1_scaffold_188_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14519..15517)
DNA (999bp) protein (333aa)
Gliding motility-associated lipoprotein GldB n=2 Tax=Parabacteroides merdae RepID=K6BDK4_9PORP
Putative gliding motility-associated lipoprotein GldB {ECO:0000313|EMBL:EDN86180.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_243G1_scaffold_188_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15691..16965
DNA (1275bp) protein (425aa)
MATE efflux family protein n=2 Tax=Parabacteroides merdae RepID=A7AGC5_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EDN86181.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
multidrug efflux pump BexA
L3_121_243G1_scaffold_188_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16980..18104)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGC6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13590.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA polymerase III subunit delta
L3_121_243G1_scaffold_188_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18168..18338)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGC7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86183.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_243G1_scaffold_188_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18584..19627
DNA (1044bp) protein (348aa)
L-asparaginase, type I n=2 Tax=Parabacteroides merdae RepID=A7AGD0_9PORP
L-asparaginase, type I {ECO:0000313|EMBL:EDN86186.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L-asparaginase I
L3_121_243G1_scaffold_188_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19712..20662)
DNA (951bp) protein (317aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Methylenetetrahydrofolate reductase n=3 Tax=Parabacteroides RepID=A7AGD1_9PORP
5,10-methylenetetrahydrofolate reductase
L3_121_243G1_scaffold_188_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21225..22244
DNA (1020bp) protein (340aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=2 Tax=Parabacteroides merdae RepID=A7AGD3_9PORP
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EDN86189.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_243G1_scaffold_188_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22401..23579
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13585.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_243G1_scaffold_188_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23610..27158
DNA (3549bp) protein (1183aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Pyruvate-flavodoxin oxidoreductase n=3 Tax=Parabacteroides RepID=A7AGD6_9PORP
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_121_243G1_scaffold_188_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27367..28029
DNA (663bp) protein (221aa)
HDIG domain protein n=2 Tax=Parabacteroides merdae RepID=A7AGD8_9PORP
HDIG domain protein {ECO:0000313|EMBL:EDN86194.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metal dependent phosphohydrolase
L3_121_243G1_scaffold_188_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28105..29151
DNA (1047bp) protein (349aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGD9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86195.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_243G1_scaffold_188_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29261..30436)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB73_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13581.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_243G1_scaffold_188_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30547..31323
DNA (777bp) protein (259aa)
Cof-like hydrolase n=3 Tax=Parabacteroides RepID=A7AGE3_9PORP
Cof-like hydrolase {ECO:0000313|EMBL:EDN86198.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_243G1_scaffold_188_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31355..31897
DNA (543bp) protein (181aa)
Carbonate dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X393_9PORP
Carbonate dehydratase {ECO:0000313|EMBL:CDD13579.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
carbonic anhydrase
L3_121_243G1_scaffold_188_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32085..32243
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZSV5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13578.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_243G1_scaffold_188_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32507..33505
DNA (999bp) protein (333aa)
Peptidase, M28 family n=2 Tax=Parabacteroides merdae RepID=A7AGE6_9PORP
Peptidase, M28 family {ECO:0000313|EMBL:EDN86202.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aminopeptidase
L3_121_243G1_scaffold_188_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34042..35805)
DNA (1764bp) protein (588aa)
SusD family protein n=2 Tax=Parabacteroides merdae RepID=A7AGE8_9PORP
SusD family protein {ECO:0000313|EMBL:EDN86204.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_243G1_scaffold_188_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35822..39043)
DNA (3222bp) protein (1074aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides merdae RepID=K6C097_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13575.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative outer membrane protein probably involved in nutrient binding
L3_121_243G1_scaffold_188_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40003..40155
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A3V6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15109.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_243G1_scaffold_188_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40245..40628)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUW8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15108.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
starch-binding protein
L3_121_243G1_scaffold_188_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40778..43951
DNA (3174bp) protein (1058aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BDI6_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD15107.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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