ggKbase home page

L3_121_243G1_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_210_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..3144
DNA (3144bp) protein (1048aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides fragilis RepID=I9B4G2_BACFG
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXZ46040.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
putative outer membrane protein probably involved in nutrient binding
L3_121_243G1_scaffold_210_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3166..4803
DNA (1638bp) protein (546aa)
SusD family protein n=3 Tax=Bacteroides RepID=D1JPX2_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EYE47150.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
putative outer membrane protein probably involved in nutrient binding
L3_121_243G1_scaffold_210_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4821..6350
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64XT4_BACFR
Putative membrane protein {ECO:0000313|EMBL:EYE56325.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
hypothetical protein
L3_121_243G1_scaffold_210_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6362..7798
DNA (1437bp) protein (479aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VGZ7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01402.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative cytochrome c binding protein
L3_121_243G1_scaffold_210_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7905..10556
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I5E3_9BACE
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EXY67624.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
putative beta-glucosidase
L3_121_243G1_scaffold_210_6
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10711..11622)
DNA (912bp) protein (304aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I3HRL4_BACFG
putative AraC transcriptional regulatory protein
Putative AraC transcriptional regulatory protein {ECO:0000313|EMBL:CDD38596.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_121_243G1_scaffold_210_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11745..13124
DNA (1380bp) protein (460aa)
MFS transporter, SP family n=6 Tax=Bacteroides RepID=D1JPW7_9BACE
MFS transporter, sugar porter family protein {ECO:0000313|EMBL:EXY92012.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
araE; putative sugar-proton symporter
L3_121_243G1_scaffold_210_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13138..16440
DNA (3303bp) protein (1101aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FYP9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87054.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
putative TPR-domain protein
L3_121_243G1_scaffold_210_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16437..19208
DNA (2772bp) protein (924aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I5E7_9BACE
Glycosyl hydrolases family 2, sugar binding domain protein {ECO:0000313|EMBL:EXZ29930.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
putative beta-glucuronidase
L3_121_243G1_scaffold_210_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19332..21599
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G697_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87056.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
hypothetical protein
L3_121_243G1_scaffold_210_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22705..24099
DNA (1395bp) protein (465aa)
Glycosyl hydrolase family 109 protein 1 n=13 Tax=Bacteroides RepID=G1091_BACFN
putative GFO/IDH/MOCA family oxidoreductase
Glycosyl hydrolase family 109 protein 1 {ECO:0000313|EMBL:EKA87057.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_121_243G1_scaffold_210_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24217..25101
DNA (885bp) protein (295aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=D1JPW1_9BACE
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ55114.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_121_243G1_scaffold_210_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25127..28462
DNA (3336bp) protein (1112aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9VH22_BACFG
bgaM; putative beta-galactosidase
L3_121_243G1_scaffold_210_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28484..29569
DNA (1086bp) protein (362aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64XU7_BACFR
putative desulfatase
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:EXZ06803.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L3_121_243G1_scaffold_210_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29550..30203)
DNA (654bp) protein (218aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WLW4_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87061.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_121_243G1_scaffold_210_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30231..31130)
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HRM5_BACFG
EamA-like transporter family protein {ECO:0000313|EMBL:EXY92018.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative transmembrane protein
L3_121_243G1_scaffold_210_17
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31162..31920)
DNA (759bp) protein (253aa)
truA; putative tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
tRNA pseudouridine synthase A n=6 Tax=Bacteroides RepID=TRUA_BACFN
L3_121_243G1_scaffold_210_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32001..33155)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8XDX5_BACFG
Flavin reductase like domain protein {ECO:0000313|EMBL:EXY75425.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
hypothetical protein
L3_121_243G1_scaffold_210_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33187..34974)
DNA (1788bp) protein (596aa)
Alpha-1,3-galactosidase B; EC=3.2.1.n1;; EC=3.2.1.n2;; Exo-alpha-galactosidase B; EC=3.2.1.22;; Flags: Precursor;; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Alpha-1,3-galactosidase B n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=GLAB_BACFR
hypothetical protein
L3_121_243G1_scaffold_210_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35129..35626
DNA (498bp) protein (166aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q64XV3_BACFR
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EXY92102.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_121_243G1_scaffold_210_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35651..37276
DNA (1626bp) protein (542aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WLV8_BACF6
flotillin-like protein
SPFH domain / Band 7 family protein {ECO:0000313|EMBL:EYE56455.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_121_243G1_scaffold_210_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37360..38040)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I5G1_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47671.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_121_243G1_scaffold_210_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38205..39218
DNA (1014bp) protein (338aa)
Phosphate starvation-inducible protein PhoH n=14 Tax=Bacteroides RepID=Q64XV6_BACFR
putative phosphate starvation-inducible PhoH-like protein
AAA domain protein {ECO:0000313|EMBL:EXY92120.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_121_243G1_scaffold_210_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39238..40182
DNA (945bp) protein (315aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=12 Tax=Bacteroides RepID=PUR7_BACFN
purC; putative succinoaminoimidazolecarboximide ribonucleotide (SAICAR) synthetase
L3_121_243G1_scaffold_210_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40304..41041
DNA (738bp) protein (246aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Demethylmenaquinone methyltransferase n=13 Tax=Bacteroides RepID=UBIE_BACFN
ubiE; putative ubiquinone/menaquinone biosynthesis methyltransferase
L3_121_243G1_scaffold_210_26
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41068..41811
DNA (744bp) protein (248aa)
Shikimate 5-dehydrogenase n=13 Tax=Bacteroides RepID=C6I5G5_9BACE
aroE; putative shikimate 5-dehydrogenase
Putative shikimate 5-dehydrogenase {ECO:0000313|EMBL:CDD38576.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_121_243G1_scaffold_210_27
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41812..42762
DNA (951bp) protein (317aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=Q64XW0_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD38575.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_121_243G1_scaffold_210_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42764..43684
DNA (921bp) protein (307aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=E1WLV1_BACF6
hypothetical protein
Repair family protein {ECO:0000313|EMBL:EXZ79866.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_121_243G1_scaffold_210_29
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43780..44361
DNA (582bp) protein (194aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I5G8_9BACE
putative LemA family protein
Putative LemA family protein {ECO:0000313|EMBL:CDD38573.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_121_243G1_scaffold_210_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44947..46113
DNA (1167bp) protein (389aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6I5H0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIZ01375.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
purM; phosphoribosylformylglycinamidine cyclo-ligase
Displaying items 1-30 of 42 in total

View Taxonomy