ggKbase home page

L3_121_243G1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_218_1
unknown

Not on your lists

45..527
DNA (483bp) protein (161aa)

This feature has no annotations

L3_121_243G1_scaffold_218_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1172..1936
DNA (765bp) protein (255aa)
Type II restriction enzyme n=1 Tax=Alistipes sp. CAG:29 RepID=R6YAP1_9BACT
Type II restriction enzyme {ECO:0000313|EMBL:CDD25706.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Restriction endonuclease, type II, SinI
L3_121_243G1_scaffold_218_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2124..2588
DNA (465bp) protein (155aa)
Thioredoxin n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVN0_9BACT
Thioredoxin {ECO:0000313|EMBL:CDD25705.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
thioredoxin
L3_121_243G1_scaffold_218_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2595..2798
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y322_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25704.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_121_243G1_scaffold_218_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2782..3135
DNA (354bp) protein (118aa)
Transcriptional regulator MarR family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XPU8_9BACT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDD25703.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L3_121_243G1_scaffold_218_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3365..4966
DNA (1602bp) protein (534aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Putative indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z5C4_9BACT
indolepyruvate ferredoxin oxidreductase subunit alpha/beta
L3_121_243G1_scaffold_218_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5022..5624
DNA (603bp) protein (201aa)
indolepyruvate oxidoreductase n=1 Tax=Alistipes onderdonkii RepID=UPI00035F61B5
Putative indolepyruvate ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CDD25701.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
2-oxoacid:ferredoxin oxidoreductase subunit gamma
L3_121_243G1_scaffold_218_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5606..6919
DNA (1314bp) protein (438aa)
Aminotransferase class I/II n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVM6_9BACT
Aminotransferase class I/II {ECO:0000313|EMBL:CDD25700.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
aspartate/tyrosine/aromatic aminotransferase
L3_121_243G1_scaffold_218_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6924..8216
DNA (1293bp) protein (431aa)
Acetyl-CoA hydrolase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y318_9BACT
Acetyl-CoA hydrolase {ECO:0000313|EMBL:CDD25699.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyl-CoA hydrolase
L3_121_243G1_scaffold_218_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8417..10597)
DNA (2181bp) protein (727aa)
peptidase S46 n=1 Tax=Alistipes onderdonkii RepID=UPI000378D305
Uncharacterized protein {ECO:0000313|EMBL:EFR57458.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Peptidase S46
L3_121_243G1_scaffold_218_11
unknown

Not on your lists

10699..10869
DNA (171bp) protein (57aa)

This feature has no annotations

L3_121_243G1_scaffold_218_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11006..12958)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVM1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25695.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_121_243G1_scaffold_218_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13003..14607)
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037BD9C0
Uncharacterized protein {ECO:0000313|EMBL:CDD25694.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_121_243G1_scaffold_218_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14625..16124)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035FCBCC
Uncharacterized protein {ECO:0000313|EMBL:CDD25693.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_121_243G1_scaffold_218_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16128..17360)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z5B6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25692.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_121_243G1_scaffold_218_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17366..20197)
DNA (2832bp) protein (944aa)
TonB-dependent receptor n=1 Tax=Alistipes onderdonkii RepID=UPI00037CC20E
TonB-dependent receptor {ECO:0000313|EMBL:CDD25691.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane receptor protein
L3_121_243G1_scaffold_218_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20638..21327
DNA (690bp) protein (230aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVL9_9BACT
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDD25690.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter ATPase
L3_121_243G1_scaffold_218_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21324..22580
DNA (1257bp) protein (419aa)
Efflux ABC transporter permease protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y310_9BACT
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD25689.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter permease
L3_121_243G1_scaffold_218_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22586..23845
DNA (1260bp) protein (420aa)
ABC-type antimicrobial peptide transport system permease component n=1 Tax=Alistipes sp. CAG:29 RepID=R6XPT3_9BACT
ABC-type antimicrobial peptide transport system permease component {ECO:0000313|EMBL:CDD25688.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter permease
L3_121_243G1_scaffold_218_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23871..24980
DNA (1110bp) protein (370aa)
Efflux transporter RND family MFP subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z5B1_9BACT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD25687.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RND family efflux transporter MFP subunit
L3_121_243G1_scaffold_218_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24999..26375
DNA (1377bp) protein (459aa)
Outer membrane protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YAM9_9BACT
Outer membrane protein {ECO:0000313|EMBL:CDD25686.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane protein
L3_121_243G1_scaffold_218_22
unknown

Not on your lists

comp(26495..26623)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_121_243G1_scaffold_218_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26761..28422
DNA (1662bp) protein (554aa)
TrkA C-terminal domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVL5_9BACT
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDD25685.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
permease
L3_121_243G1_scaffold_218_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28391..29716)
DNA (1326bp) protein (442aa)
Small-conductance mechanosensitive channel n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y308_9BACT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CDD25684.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
small-conductance mechanosensitive channel
L3_121_243G1_scaffold_218_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29957..30460)
DNA (504bp) protein (168aa)
Hydrolase NUDIX family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XPS9_9BACT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD25683.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
isopentenyldiphosphate isomerase
L3_121_243G1_scaffold_218_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30447..31604)
DNA (1158bp) protein (386aa)
Arabinose efflux permease family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z5A7_9BACT
Arabinose efflux permease family protein {ECO:0000313|EMBL:CDD25682.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
arabinose efflux permease family protein
L3_121_243G1_scaffold_218_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31742..34246)
DNA (2505bp) protein (835aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YAM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25681.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_121_243G1_scaffold_218_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34250..35662)
DNA (1413bp) protein (471aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
PPIC-type PPIASE domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVL2_9BACT
parvulin-like peptidyl-prolyl isomerase
L3_121_243G1_scaffold_218_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35662..36552)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y305_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25679.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_121_243G1_scaffold_218_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36612..37541)
DNA (930bp) protein (310aa)
Putative metal-dependent membrane protease n=1 Tax=Alistipes sp. CAG:29 RepID=R6XPS4_9BACT
Putative metal-dependent membrane protease {ECO:0000313|EMBL:CDD25678.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
metal-dependent membrane protease
Displaying items 1-30 of 55 in total

View Taxonomy