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L3_121_243G1_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_241_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..184
DNA (183bp) protein (61aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=F6C936_BIFBA
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:KEY26524.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_121_243G1_scaffold_241_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(957..3287)
DNA (2331bp) protein (777aa)
GTP pyrophosphokinase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMX6_BIFBS
GTP pyrophosphokinase {ECO:0000313|EMBL:ADO53410.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
relA; GTP pyrophosphokinase
L3_121_243G1_scaffold_241_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3437..3925)
DNA (489bp) protein (163aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Bifidobacterium bifidum RepID=E4VAL3_BIFBI
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
L3_121_243G1_scaffold_241_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3913..4206)
DNA (294bp) protein (98aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WIV9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53412.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_241_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4356..5411
DNA (1056bp) protein (352aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4VAL5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43271.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_121_243G1_scaffold_241_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5528..6760)
DNA (1233bp) protein (411aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=2 Tax=Bifidobacterium bifidum RepID=U2CHR8_BIFBI
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:ERI83588.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98447.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Nucleotide pyrophosphatase
L3_121_243G1_scaffold_241_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6909..9581
DNA (2673bp) protein (891aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
GyrA DNA gyrase subunit A n=6 Tax=Bifidobacterium bifidum RepID=E4NXN2_BIFBP
L3_121_243G1_scaffold_241_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9807..14453)
DNA (4647bp) protein (1549aa)
ATP-dependent helicase II n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMY2_BIFBS
ATP-dependent helicase II {ECO:0000313|EMBL:ADO53416.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
ATP-dependent helicase II
L3_121_243G1_scaffold_241_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14511..14717)
DNA (207bp) protein (69aa)
DNA-binding protein n=4 Tax=Bifidobacterium RepID=U2DUW8_BIFBI
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ADO53417.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_241_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14724..15308)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMY4_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53418.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_241_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15524..16963
DNA (1440bp) protein (480aa)
Aspartate ammonia-lyase n=3 Tax=Bifidobacterium bifidum RepID=E3EMY5_BIFBS
ansB; aspartate ammonia-lyase
Aspartate ammonia-lyase {ECO:0000313|EMBL:ADO53419.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_241_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17044..19356)
DNA (2313bp) protein (771aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
GyrB DNA gyrase subunit B n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G971_9BIFI
GyrB DNA gyrase subunit B {ECO:0000313|EMBL:CDB21988.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_121_243G1_scaffold_241_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19485..21011)
DNA (1527bp) protein (509aa)
RNA polymerase sigma factor SigA n=2 Tax=Bifidobacterium bifidum RepID=E4NXN7_BIFBP
RNA polymerase principal sigma factor HrdB
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_121_243G1_scaffold_241_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21162..21911)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXN8_BIFBP
Uncharacterized protein {ECO:0000313|EMBL:BAQ98455.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_121_243G1_scaffold_241_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22031..23128
DNA (1098bp) protein (366aa)
idsA; polyprenyl synthetase (EC:2.5.1.10)
Polyprenyl synthetase n=3 Tax=Bifidobacterium bifidum RepID=E3EMY9_BIFBS
Polyprenyl synthetase {ECO:0000313|EMBL:ERI83597.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98456.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_121_243G1_scaffold_241_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23193..25334
DNA (2142bp) protein (714aa)
pknA; serine/threonine protein kinase (EC:2.7.11.1)
PknA Serine/threonine protein kinase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXP0_BIFBP
Kinase domain protein {ECO:0000313|EMBL:EFR50668.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_121_243G1_scaffold_241_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25432..26148)
DNA (717bp) protein (239aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyl transferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=3 Tax=Bifidobacterium RepID=E3EMZ1_BIFBS
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ADO53425.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_241_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26197..26796
DNA (600bp) protein (200aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4VAS0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83600.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_121_243G1_scaffold_241_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26835..27881)
DNA (1047bp) protein (349aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXP3_BIFBP
L3_121_243G1_scaffold_241_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28574..31528)
DNA (2955bp) protein (985aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAS2_BIFBI
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
secA; protein translocase subunit SecA
L3_121_243G1_scaffold_241_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31668..32333)
DNA (666bp) protein (222aa)
Ribosome-associated factor Y n=8 Tax=Bifidobacterium RepID=E3EMZ5_BIFBS
ribosome-associated factor Y
Ribosome-associated factor Y {ECO:0000313|EMBL:EKE51432.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_121_243G1_scaffold_241_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32494..32718
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2HV73_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83604.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_121_243G1_scaffold_241_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32605..33243)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMZ6_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53430.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_241_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33691..34116)
DNA (426bp) protein (142aa)
RecX-like protein n=4 Tax=Bifidobacterium RepID=E3EMZ7_BIFBS
recX; RecX-like protein
RecX-like protein {ECO:0000313|EMBL:CDB24342.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_121_243G1_scaffold_241_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(34308..35498)
DNA (1191bp) protein (397aa)
Protein RecA n=6 Tax=Bifidobacterium RepID=E3EMZ8_BIFBS
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_121_243G1_scaffold_241_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35768..36001)
DNA (234bp) protein (78aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=I3WIY0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15870.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_121_243G1_scaffold_241_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36173..36685)
DNA (513bp) protein (171aa)
Transcriptional regulator n=4 Tax=Bifidobacterium bifidum RepID=E3EN00_BIFBS
Transcriptional regulator {ECO:0000313|EMBL:EKF15869.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
transcriptional regulator
L3_121_243G1_scaffold_241_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36746..37291)
DNA (546bp) protein (182aa)
Competence-damage protein cinA n=5 Tax=Bifidobacterium RepID=E3EN01_BIFBS
cinA; putative nucleotide-utilizing enzyme
Competence-damage protein cinA {ECO:0000313|EMBL:ADO53435.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_241_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37363..38034)
DNA (672bp) protein (224aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyl transferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EFR50681.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EFR50681.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
CDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyl transferase n=4 Tax=Bifidobacterium RepID=I3WIY3_BIFBI
L3_121_243G1_scaffold_241_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38161..41013)
DNA (2853bp) protein (951aa)
DNA translocase n=2 Tax=Bifidobacterium bifidum RepID=I3WIY4_BIFBI
DNA translocase {ECO:0000313|EMBL:AFL04847.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
ftsK; DNA translocase
Displaying items 1-30 of 50 in total

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