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L3_121_243G1_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_276_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..452
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQR7_9FIRM
Peptidase M23 {ECO:0000313|EMBL:KJF38921.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
peptidase M23B
L3_121_243G1_scaffold_276_2
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(271..1113)
DNA (843bp) protein (281aa)
glycerate 2-kinase (EC:1.1.1.81 2.7.1.-)
Hydroxypyruvate reductase n=1 Tax=Eubacterium sp. CAG:248 RepID=R6KWV5_9FIRM
Hydroxypyruvate reductase {ECO:0000313|EMBL:CDB66537.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
L3_121_243G1_scaffold_276_3

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comp(1153..1920)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000362450C
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHF23800.1}; TaxID=1393424 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig140.;"
hypothetical protein
L3_121_243G1_scaffold_276_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2106..3485)
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBV4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EET61907.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
MATE efflux family protein
L3_121_243G1_scaffold_276_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3537..4502)
DNA (966bp) protein (322aa)
Putative glycerate dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EER6_9FIRM
Putative glycerate dehydrogenase {ECO:0000313|EMBL:EEQ58513.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
D-isomer specific 2-hydroxyacid dehydrogenase
L3_121_243G1_scaffold_276_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4502..6730)
DNA (2229bp) protein (743aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBV5_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:KJF39272.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Beta-glucuronidase
L3_121_243G1_scaffold_276_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7010..7957
DNA (948bp) protein (316aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFB77581.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFB77581.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIB3_9FIRM
hypothetical protein
L3_121_243G1_scaffold_276_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8060..9277
DNA (1218bp) protein (406aa)
Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S934_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDP22319.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
AraC family transcriptional regulator
L3_121_243G1_scaffold_276_9
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9630..11015
DNA (1386bp) protein (462aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIT3_9CLOT
FAD dependent oxidoreductase {ECO:0000313|EMBL:EXG87160.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
pyridine nucleotide-disulfide oxidoreductase family protein
L3_121_243G1_scaffold_276_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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11110..12594
DNA (1485bp) protein (495aa)
Sugar transporter n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3V7_ROSHA
Uncharacterized protein {ECO:0000313|EMBL:KJF38965.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
sugar transporter
L3_121_243G1_scaffold_276_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12943..13365
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69115.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_243G1_scaffold_276_12
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13906..15852
DNA (1947bp) protein (649aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU59_9FIRM
Rad3-related DNA helicase {ECO:0000313|EMBL:KJF38885.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Rad3-related DNA helicases
L3_121_243G1_scaffold_276_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15893..16345
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69118.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_243G1_scaffold_276_14
unknown

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16338..16523
DNA (186bp) protein (62aa)

This feature has no annotations

L3_121_243G1_scaffold_276_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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17105..20860
DNA (3756bp) protein (1252aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40135.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_121_243G1_scaffold_276_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21045..21341
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69118.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_121_243G1_scaffold_276_17
unknown

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21334..21519
DNA (186bp) protein (62aa)

This feature has no annotations

L3_121_243G1_scaffold_276_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21698..23287
DNA (1590bp) protein (530aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63699.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Resolvase domain
L3_121_243G1_scaffold_276_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23826..23975
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63686.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_121_243G1_scaffold_276_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23972..24310
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63685.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
CGGC domain.
L3_121_243G1_scaffold_276_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24270..25406
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63684.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
iron compound ABC transporter periplasmic iron compound-binding protein
L3_121_243G1_scaffold_276_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25512..26591
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63683.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_243G1_scaffold_276_23
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26588..27352
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZP1_9FIRM
ABC transporter {ECO:0000313|EMBL:KJF39633.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC transporter
L3_121_243G1_scaffold_276_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27642..28991
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZP0_9FIRM
Multidrug transporter MATE {ECO:0000313|EMBL:KJF39632.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
drug/sodium antiporter
L3_121_243G1_scaffold_276_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29322..31571)
DNA (2250bp) protein (750aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63680.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_243G1_scaffold_276_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31699..32277
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63679.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transport protein, permease
L3_121_243G1_scaffold_276_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32232..32477
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63677.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_243G1_scaffold_276_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32553..33761
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39627.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
oxidoreductase
L3_121_243G1_scaffold_276_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33973..34692
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63673.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_121_243G1_scaffold_276_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34799..35197
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63672.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
oxidoreductase
Displaying items 1-30 of 91 in total

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