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L3_121_243G1_scaffold_315

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Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_315_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..172
DNA (171bp) protein (57aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
mRNA interferase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJR7_9FIRM
Growth inhibitor
L3_121_243G1_scaffold_315_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

153..401
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJR6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93863.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_121_243G1_scaffold_315_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

510..2201
DNA (1692bp) protein (564aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJR5_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK93862.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_121_243G1_scaffold_315_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2203..3894
DNA (1692bp) protein (564aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJR4_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK93861.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_121_243G1_scaffold_315_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3891..5462
DNA (1572bp) protein (524aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZX1_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL27331.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_243G1_scaffold_315_6
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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5929..7293
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B516D9
KAP family P-loop domain protein {ECO:0000313|EMBL:EFF68825.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
KAP family P-loop domain-containing protein
L3_121_243G1_scaffold_315_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7316..8419
DNA (1104bp) protein (368aa)
TIR domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3D9Q0_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CEP48201.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_121_243G1_scaffold_315_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8597..9073
DNA (477bp) protein (159aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78576.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_243G1_scaffold_315_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9250..10200
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78575.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_121_243G1_scaffold_315_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10275..11069)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78574.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type uncharacterized transport system, ATPase component
L3_121_243G1_scaffold_315_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11072..11989)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80430.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type uncharacterized transport system, permease component
L3_121_243G1_scaffold_315_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12139..13125)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80432.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type uncharacterized transport system, periplasmic component
L3_121_243G1_scaffold_315_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13389..14153
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80433.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_243G1_scaffold_315_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14423..15025
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78570.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_121_243G1_scaffold_315_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15029..16312)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80436.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_121_243G1_scaffold_315_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16657..18162
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78568.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_121_243G1_scaffold_315_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18212..18562
DNA (351bp) protein (117aa)
TIGR04097 family integral membrane protein n=2 Tax=Ruminococcus RepID=C6J8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80438.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_121_243G1_scaffold_315_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18636..18776
DNA (141bp) protein (47aa)
RSAM-modified six-cysteine peptide SCIFF n=2 Tax=Ruminococcus RepID=C6J8B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80439.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_121_243G1_scaffold_315_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18857..20224
DNA (1368bp) protein (456aa)
Six-Cys-in-45 modification radical SAM protein n=2 Tax=Ruminococcus RepID=C6J8B3_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EES78565.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L3_121_243G1_scaffold_315_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20336..22744
DNA (2409bp) protein (803aa)
Protein-export membrane protein SecD n=2 Tax=Ruminococcus RepID=C6J8B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80441.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
protein translocase subunit secF/protein translocase subunit secD
L3_121_243G1_scaffold_315_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22826..24538
DNA (1713bp) protein (571aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B1_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EES78563.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_243G1_scaffold_315_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24686..25210
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=C6J8B0_9FIRM
L3_121_243G1_scaffold_315_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25248..27578
DNA (2331bp) protein (777aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A9_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:EES78561.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_243G1_scaffold_315_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27643..28272
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78560.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Zn-dependent hydrolases, including glyoxylases
L3_121_243G1_scaffold_315_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28265..29779
DNA (1515bp) protein (505aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A7_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EES78559.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_243G1_scaffold_315_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29797..30459
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78558.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HD-GYP domain
L3_121_243G1_scaffold_315_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


30422..31648
DNA (1227bp) protein (409aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine-tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A5_9FIRM
Histidine-tRNA ligase {ECO:0000313|EMBL:EES78557.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_243G1_scaffold_315_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31745..33541
DNA (1797bp) protein (599aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A4_9FIRM
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EES78556.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_243G1_scaffold_315_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33544..34302
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78555.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted permeases
L3_121_243G1_scaffold_315_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34470..35681)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78554.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
Displaying items 1-30 of 87 in total

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