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L3_121_243G1_scaffold_352

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_352_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..320)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQJ2_BIFLS
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75491.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_121_243G1_scaffold_352_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(372..470)
DNA (99bp) protein (33aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=S2ZZP5_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75492.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_121_243G1_scaffold_352_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

731..1819
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIR7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04780.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_121_243G1_scaffold_352_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1954..2352
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU48_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29383.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
DNA/RNA helicase
L3_121_243G1_scaffold_352_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2438..3256)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU47_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KIM01015.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_121_243G1_scaffold_352_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3310..3561)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU46_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70897.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_121_243G1_scaffold_352_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3670..3861
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WIU9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04812.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_121_243G1_scaffold_352_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3861..4631
DNA (771bp) protein (257aa)
Toxin-antitoxin system, toxin component, Fic family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSE6_BIFBR
Toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:EFE88359.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00156.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ficl; Fic family protein
L3_121_243G1_scaffold_352_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4905..6248)
DNA (1344bp) protein (448aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSE7_BIFBR
phage integrase family protein
Putative phage integrase {ECO:0000313|EMBL:BAR00155.1}; Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFE88360.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_121_243G1_scaffold_352_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6353..6499)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPZ1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89728.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_121_243G1_scaffold_352_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6641..6937
DNA (297bp) protein (99aa)
Addiction module antitoxin, RelB/DinJ family protein n=4 Tax=Bifidobacterium bifidum RepID=E3EMG0_BIFBS
DNA-damage-inducible protein J
Uncharacterized protein {ECO:0000313|EMBL:KFI43263.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_121_243G1_scaffold_352_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6930..7289
DNA (360bp) protein (120aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=E4VAK7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB21973.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_121_243G1_scaffold_352_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7118..7618)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCA7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI43266.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_121_243G1_scaffold_352_14
unknown

Not on your lists

7847..8011
DNA (165bp) protein (55aa)

This feature has no annotations

L3_121_243G1_scaffold_352_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8025..8564
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bifidobacterium RepID=E3EMF9_BIFBS
peptidyl-prolyl cis-trans isomerase
L3_121_243G1_scaffold_352_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8710..9561)
DNA (852bp) protein (284aa)
Hydrolase (HAD superfamily) n=2 Tax=Bifidobacterium bifidum RepID=E3EMF8_BIFBS
hydrolase
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:ADO53394.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_243G1_scaffold_352_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9713..10264
DNA (552bp) protein (184aa)
Methionine import ATP-binding protein n=2 Tax=Bifidobacterium bifidum RepID=I3WIQ4_BIFBI
metN; methionine import ATP-binding protein
Methionine import ATP-binding protein {ECO:0000313|EMBL:AFL04767.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_121_243G1_scaffold_352_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10301..11452
DNA (1152bp) protein (384aa)
Amidohydrolase n=3 Tax=Bifidobacterium bifidum RepID=U2DQ53_BIFBI
ytnL; putative hydrolase
Amidohydrolase {ECO:0000313|EMBL:ERI83697.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98434.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_121_243G1_scaffold_352_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11535..13232
DNA (1698bp) protein (566aa)
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:AFL04765.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AFL04765.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
nadE; glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
Glutamine-dependent NAD(+) synthetase n=3 Tax=Bifidobacterium bifidum RepID=I3WIQ2_BIFBI
L3_121_243G1_scaffold_352_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13310..13546
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WIQ1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR50615.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_121_243G1_scaffold_352_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13666..16041
DNA (2376bp) protein (792aa)
pflB; formate acetyl transferase (EC:2.3.1.54)
Formate acetyltransferase n=5 Tax=Bifidobacterium bifidum RepID=E3EMF3_BIFBS
Formate C-acetyltransferase {ECO:0000313|EMBL:ERI83694.1}; Formate acetyltransferase {ECO:0000313|EMBL:BAQ98431.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_121_243G1_scaffold_352_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16233..17114
DNA (882bp) protein (294aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Pyruvate formate-lyase 1-activating enzyme n=6 Tax=Bifidobacterium RepID=I3WIP9_BIFBI
L3_121_243G1_scaffold_352_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17211..17840
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=U2DQ50_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50612.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_121_243G1_scaffold_352_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17830..19116
DNA (1287bp) protein (429aa)
ribonuclease D (EC:3.1.13.5)
3'-5' exonuclease n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DVA5_BIFBI
3'-5' exonuclease {ECO:0000313|EMBL:ERI83691.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98428.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_121_243G1_scaffold_352_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19169..20554
DNA (1386bp) protein (462aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Trigger factor n=5 Tax=Bifidobacterium RepID=E3EME9_BIFBS
tig; trigger factor Tig
L3_121_243G1_scaffold_352_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20760..22163
DNA (1404bp) protein (468aa)
Chloride channel protein n=2 Tax=Bifidobacterium RepID=R6GC84_9BIFI
Chloride channel protein {ECO:0000313|EMBL:CDB21960.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
chloride channel protein
L3_121_243G1_scaffold_352_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22370..22756)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MS65_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF14978.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_121_243G1_scaffold_352_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22957..23538
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ATP-dependent Clp protease proteolytic subunit n=8 Tax=Bifidobacterium RepID=E3EME7_BIFBS
clp1; ATP-dependent Clp protease proteolytic subunit 1
L3_121_243G1_scaffold_352_29
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23544..24263
DNA (720bp) protein (240aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
clpP2; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G934_9BIFI
L3_121_243G1_scaffold_352_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24364..25677
DNA (1314bp) protein (438aa)
ATP-dependent Clp protease ATP-binding subunit (EC:3.6.1.3)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXK8_BIFBP
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Displaying items 1-30 of 68 in total

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