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L3_121_243G1_scaffold_783

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_783_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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711..1304
DNA (594bp) protein (198aa)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
ATP synthase subunit alpha n=2 Tax=Bifidobacterium adolescentis RepID=ATPA_BIFAA
L3_121_243G1_scaffold_783_2
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1308..2228
DNA (921bp) protein (307aa)
ATP synthase gamma chain n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0D2_9BIFI
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
F0F1 ATP synthase subunit gamma
L3_121_243G1_scaffold_783_3
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2237..3721
DNA (1485bp) protein (495aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
ATP synthase subunit beta n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMK2_9BIFI
ATP synthase subunit beta
L3_121_243G1_scaffold_783_4
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3721..3999
DNA (279bp) protein (93aa)
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6W6_BIFAD
F0F1 ATP synthase, subunit epsilon {ECO:0000313|EMBL:KFI85974.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
ATP synthase epsilon chain
L3_121_243G1_scaffold_783_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4149..4853
DNA (705bp) protein (235aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Endonuclease NucS n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0W3_9BIFI
hypothetical protein
L3_121_243G1_scaffold_783_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4902..5870)
DNA (969bp) protein (323aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6W4_BIFAD
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
fkbP1; secreted peptidyl-prolyl cis-trans isomerase protein
L3_121_243G1_scaffold_783_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5939..7069
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GML1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI95015.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_121_243G1_scaffold_783_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7069..8067
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A3C0_BIFAA
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:AII77017.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE06502.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_243G1_scaffold_783_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8200..9168
DNA (969bp) protein (323aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A3B9_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06501.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_243G1_scaffold_783_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9665..10054
DNA (390bp) protein (130aa)
Putative endoribonuclease L-PSP n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V8_BIFAD
Putative translational inhibitor protein {ECO:0000313|EMBL:KFI95018.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative 14.5 kDa translational inhibitor protein
L3_121_243G1_scaffold_783_11
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10316..11806
DNA (1491bp) protein (497aa)
Amino acid permease n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V6_BIFAD
Amino acid permease {ECO:0000313|EMBL:KFI95019.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
amino acid permease
L3_121_243G1_scaffold_783_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11838..13628
DNA (1791bp) protein (597aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Arginine--tRNA ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V5_BIFAD
arginyl-tRNA synthetase
L3_121_243G1_scaffold_783_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13663..15261
DNA (1599bp) protein (533aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Diaminopimelate decarboxylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V4_BIFAD
diaminopimelate decarboxylase
L3_121_243G1_scaffold_783_14
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15420..16736
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Homoserine dehydrogenase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3B4_BIFAA
homoserine dehydrogenase
L3_121_243G1_scaffold_783_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16908..17912
DNA (1005bp) protein (335aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Homoserine kinase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3B3_BIFAA
thrB; homoserine kinase
L3_121_243G1_scaffold_783_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17909..19336
DNA (1428bp) protein (476aa)
Septum formation protein Maf n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V0_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06494.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_243G1_scaffold_783_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19447..20565
DNA (1119bp) protein (373aa)
LacI-type transcriptional regulator n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H731_9BIFI
LacI-type transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:AJE06493.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_243G1_scaffold_783_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20730..22352
DNA (1623bp) protein (541aa)
Probable sugar kinase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3B0_BIFAA
sugar kinase
Probable sugar kinase {ECO:0000313|EMBL:BAF40193.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_121_243G1_scaffold_783_19
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22396..23088
DNA (693bp) protein (231aa)
L-ribulose-5-phosphate 4-epimerase n=3 Tax=Bifidobacterium RepID=A1A3A9_BIFAA
L-ribulose-5-phosphate 4-epimerase
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CCY20539.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_121_243G1_scaffold_783_20
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23142..23519
DNA (378bp) protein (126aa)
araA; L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L-arabinose isomerase n=3 Tax=Bifidobacterium RepID=ARAA_BIFAA
Displaying 20 items

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