ggKbase home page

L3_121_243G1_scaffold_327

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_243G1_scaffold_327_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(302..523)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GN14_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93815.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_121_243G1_scaffold_327_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(526..783)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XBY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93161.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_121_243G1_scaffold_327_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(789..1697)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71902.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_121_243G1_scaffold_327_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1784..1981)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RUG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL68521.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_121_243G1_scaffold_327_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1998..2540)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40253.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_121_243G1_scaffold_327_6
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2553..3578)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AWA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84434.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_121_243G1_scaffold_327_7
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3605..4666)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MRU7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36483.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_121_243G1_scaffold_327_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4669..5586)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KM70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK24595.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
phage-like protein
L3_121_243G1_scaffold_327_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5583..10565)
DNA (4983bp) protein (1661aa)
Tape measure domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LIN3_9FIRM
Tape measure domain protein {ECO:0000313|EMBL:EET59422.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
tape measure domain
L3_121_243G1_scaffold_327_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10562..10939)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=G5HR09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58986.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_121_243G1_scaffold_327_11
unknown

Not on your lists

comp(10953..11195)
DNA (243bp) protein (81aa)

This feature has no annotations

L3_121_243G1_scaffold_327_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11219..11764)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IHN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58988.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_121_243G1_scaffold_327_13
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11794..12195)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P148_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS21547.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L3_121_243G1_scaffold_327_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12284..12958)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7VS77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHL67049.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_243G1_scaffold_327_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12973..13275)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98956.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_121_243G1_scaffold_327_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13259..13582)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A5KM80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK24605.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_121_243G1_scaffold_327_17
unknown

Not on your lists

comp(13599..14009)
DNA (411bp) protein (137aa)

This feature has no annotations

L3_121_243G1_scaffold_327_18
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14050..15768)
DNA (1719bp) protein (573aa)
Caudovirus prohead protease n=1 Tax=Clostridium sp. SS2/1 RepID=B0P153_9CLOT
Phage capsid family./Caudovirus prohead protease.
Caudovirus prohead protease {ECO:0000313|EMBL:EDS21552.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_121_243G1_scaffold_327_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15755..16996)
DNA (1242bp) protein (414aa)
Putative phage portal protein, HK97 family n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KM84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI58997.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Phage portal protein.
L3_121_243G1_scaffold_327_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17051..18796)
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMU8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93836.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Phage terminase-like protein, large subunit
L3_121_243G1_scaffold_327_21
unknown

Not on your lists

18899..19075
DNA (177bp) protein (59aa)

This feature has no annotations

L3_121_243G1_scaffold_327_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19433..19840)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMU9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93837.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_121_243G1_scaffold_327_23
unknown

Not on your lists

19994..20137
DNA (144bp) protein (48aa)

This feature has no annotations

L3_121_243G1_scaffold_327_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20221..20460)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z830_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75047.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_121_243G1_scaffold_327_25
unknown

Not on your lists

comp(20537..20860)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_121_243G1_scaffold_327_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20829..21209)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7VS69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHL67040.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_243G1_scaffold_327_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21212..21430)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDO61898.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_121_243G1_scaffold_327_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21446..21862)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IHP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59001.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_121_243G1_scaffold_327_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21852..22190)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMV2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93840.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_121_243G1_scaffold_327_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22664..22900)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A5KM91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK24616.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
Displaying items 1-30 of 96 in total

View Taxonomy