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L3_121_363G1_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 316 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_1_1
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..357
DNA (357bp) protein (119aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCA7_9ACTN
rhamnose biosynthesis dTDP-glucose 4,6-dehydratase
L3_121_363G1_scaffold_1_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

372..1850
DNA (1479bp) protein (493aa)
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z837_9ACTN
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDA35853.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase
L3_121_363G1_scaffold_1_3
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1937..2647
DNA (711bp) protein (237aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEA90107.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEA90107.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCA4_9ACTN
glycosyltransferase
L3_121_363G1_scaffold_1_4
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2653..2985
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCA3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90106.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
membrane protein
L3_121_363G1_scaffold_1_5
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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3300..5393
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FMV2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY06203.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L3_121_363G1_scaffold_1_6
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5620..8640
DNA (3021bp) protein (1007aa)
Glycosyltransferase, family 8 n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCA0_9ACTN
Glycosyltransferase, family 8 {ECO:0000313|EMBL:EEA90103.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_121_363G1_scaffold_1_7
unknown

Not on your lists

8739..9335
DNA (597bp) protein (199aa)

This feature has no annotations

L3_121_363G1_scaffold_1_8
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9599..10666
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WG91_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67342.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
family 2 glycosyl transferase
L3_121_363G1_scaffold_1_9
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10690..11877
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WG90_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67341.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
family 2 glycosyl transferase
L3_121_363G1_scaffold_1_10
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12072..13961
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F918_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44705.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_121_363G1_scaffold_1_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14744..16033
DNA (1290bp) protein (430aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Trigger factor n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCU0_9ACTN
trigger factor
L3_121_363G1_scaffold_1_12
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16165..16788
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGT9_9ACTN
L3_121_363G1_scaffold_1_13
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16788..18227
DNA (1440bp) protein (480aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Collinsella sp. CAG:289 RepID=R7D8V2_9ACTN
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
L3_121_363G1_scaffold_1_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


18528..21236
DNA (2709bp) protein (903aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F825_9ACTN
L3_121_363G1_scaffold_1_15
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21615..22985
DNA (1371bp) protein (457aa)
Bifunctional protein FolC n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCS7_9ACTN
Bifunctional protein FolC {ECO:0000313|EMBL:EEA89917.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
L3_121_363G1_scaffold_1_16
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23217..24311)
DNA (1095bp) protein (365aa)
Putative rare lipoprotein A double-psi beta-barrel protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCR4_9ACTN
Putative rare lipoprotein A double-psi beta-barrel protein {ECO:0000313|EMBL:EEA89904.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Rare lipoprotein A
L3_121_363G1_scaffold_1_17
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24509..24895)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCR3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA89903.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_121_363G1_scaffold_1_18
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24879..26276)
DNA (1398bp) protein (466aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGS5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67526.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_121_363G1_scaffold_1_19
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26278..27720)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGS4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67525.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_121_363G1_scaffold_1_20
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28040..28471
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7X7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85903.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_121_363G1_scaffold_1_21
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28725..30485
DNA (1761bp) protein (587aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Threonine--tRNA ligase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F833_9ACTN
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase
L3_121_363G1_scaffold_1_22
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30720..31805
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R7AAA0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD39632.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
L3_121_363G1_scaffold_1_23
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31886..32452
DNA (567bp) protein (189aa)
membrane protein n=1 Tax=Coriobacteriaceae RepID=UPI000345FF7D
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
hypothetical protein
L3_121_363G1_scaffold_1_24
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32697..34208
DNA (1512bp) protein (504aa)
Inosine 5-monophosphate dehydrogenase {ECO:0000313|EMBL:EEA89948.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EEA89948.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
IMP dehydrogenase (EC:1.1.1.205)
Inosine 5-monophosphate dehydrogenase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCP4_9ACTN
L3_121_363G1_scaffold_1_25
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34468..35619
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F839_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP45157.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_121_363G1_scaffold_1_26
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35665..36948
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F840_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP45158.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_121_363G1_scaffold_1_27
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


37430..40018
DNA (2589bp) protein (863aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F842_9ACTN
L3_121_363G1_scaffold_1_28
unknown

Not on your lists

comp(40136..40531)
DNA (396bp) protein (132aa)

This feature has no annotations

L3_121_363G1_scaffold_1_29
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

40850..41344
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGR3_9ACTN
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_121_363G1_scaffold_1_30
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

41344..42603
DNA (1260bp) protein (420aa)
Transcription termination factor NusA n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGR2_9ACTN
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
NusA antitermination factor
Displaying items 1-30 of 316 in total

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