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L3_121_363G1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_3_1
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..362)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036D8700
Uncharacterized protein {ECO:0000313|EMBL:CCZ10109.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
polysaccharide biosynthesis protein
L3_121_363G1_scaffold_3_2
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(928..1425)
DNA (498bp) protein (166aa)
nucleotidyltransferase n=1 Tax=Butyricimonas synergistica RepID=UPI00037DBDC6
Uncharacterized protein {ECO:0000313|EMBL:KIO44515.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
cytidyltransferase-related domain-containing protein
L3_121_363G1_scaffold_3_3
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1427..1777)
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
aspartate 1-decarboxylase (EC:4.1.1.11)
aspartate decarboxylase n=1 Tax=Butyricimonas synergistica RepID=UPI00036BDC6A
L3_121_363G1_scaffold_3_4
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1790..2629)
DNA (840bp) protein (280aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Pantothenate synthetase (EC:6.3.2.1)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003701E28
L3_121_363G1_scaffold_3_5
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2714..3193)
DNA (480bp) protein (160aa)
arginine repressor ArgR n=1 Tax=Butyricimonas synergistica RepID=UPI000361286D
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
arginine repressor ArgR
L3_121_363G1_scaffold_3_6
unknown

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comp(3183..3383)
DNA (201bp) protein (67aa)

This feature has no annotations

L3_121_363G1_scaffold_3_7
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3439..4521
DNA (1083bp) protein (361aa)
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
carbamoyl phosphate synthase small subunit n=1 Tax=Butyricimonas synergistica RepID=UPI00036B5548
L3_121_363G1_scaffold_3_8
unknown

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4531..4680
DNA (150bp) protein (50aa)

This feature has no annotations

L3_121_363G1_scaffold_3_9
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4742..7951
DNA (3210bp) protein (1070aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.4.16)
carbamoyl phosphate synthase large subunit n=1 Tax=Butyricimonas synergistica RepID=UPI000379B0FD
L3_121_363G1_scaffold_3_10
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8097..8504
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035EE903
Uncharacterized protein {ECO:0000313|EMBL:KIO44521.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_121_363G1_scaffold_3_11
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8621..9790
DNA (1170bp) protein (390aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9TKX7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY69768.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
Predicted ATPase (AAA+ superfamily)
L3_121_363G1_scaffold_3_12
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10820..11926
DNA (1107bp) protein (369aa)
ATPase AAA n=1 Tax=Butyricimonas synergistica RepID=UPI0003634B72
Putative uncharacterized protein {ECO:0000313|EMBL:EFI13324.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_121_363G1_scaffold_3_13
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12097..14430
DNA (2334bp) protein (778aa)
Peptidoglycan glycosyltransferase (EC:2.4.1.129)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036099A0
Penicillin-binding protein {ECO:0000313|EMBL:KIO44522.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_121_363G1_scaffold_3_14
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14628..15992
DNA (1365bp) protein (455aa)
DNA repair protein RadA n=1 Tax=Butyricimonas synergistica RepID=UPI00035D721C
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
DNA repair protein RadA
L3_121_363G1_scaffold_3_15
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16083..17213
DNA (1131bp) protein (377aa)
ATPase {ECO:0000313|EMBL:KIO47396.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Putative uncharacterized protein id=1840181 bin=GWE2_Bacteroidetes_42_39 species=Capnocytophaga canimorsus genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Archaeal ATPase.
L3_121_363G1_scaffold_3_16
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17320..17883
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000372AC14
RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB07120.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
L3_121_363G1_scaffold_3_17
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17993..19159
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003664E65
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:CDB06587.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
anti-FecI sigma factor, FecR
L3_121_363G1_scaffold_3_18
Prevotella pleuritidis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19174..22800
DNA (3627bp) protein (1209aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003695422
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:ERK03515.1}; TaxID=1081904 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella pleuritidis F0068.;"
TonB-dependent receptor plug
L3_121_363G1_scaffold_3_19
Prevotella sp. BV3P1, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22847..24214
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035C5864
Starch-binding protein, SusD-like family {ECO:0000313|EMBL:ERT58244.1}; TaxID=1111130 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. BV3P1.;"
RagB/SusD domain-containing protein
L3_121_363G1_scaffold_3_20
unknown

Not on your lists

24237..25352
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037AC6C4
L3_121_363G1_scaffold_3_21
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25489..26412
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037CA6C4
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIO46092.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
ABC transporter
L3_121_363G1_scaffold_3_22
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26436..28775
DNA (2340bp) protein (780aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036FD010
ABC transporter {ECO:0000313|EMBL:KIO45518.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
copper ABC transporter permease
L3_121_363G1_scaffold_3_23
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28995..29540
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036E487C
RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB07641.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
L3_121_363G1_scaffold_3_24
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29627..30796
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037E8C13
anti-FecI sigma factor, FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADY31979.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_121_363G1_scaffold_3_25
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30946..34209
DNA (3264bp) protein (1088aa)
TonB-dependent receptor plug n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FHQ2_9PORP
TonB-dependent receptor plug {ECO:0000313|EMBL:CDB08461.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
TonB-dependent receptor plug
L3_121_363G1_scaffold_3_26
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34235..35716
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F8K7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB08460.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
L3_121_363G1_scaffold_3_27
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35728..36540
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FGE2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB08459.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
L3_121_363G1_scaffold_3_28
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36573..38114
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F5P8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB08458.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
L3_121_363G1_scaffold_3_29
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38140..39231
DNA (1092bp) protein (364aa)
Thioredoxin domain-containing protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6G2D4_9PORP
Thioredoxin domain-containing protein {ECO:0000313|EMBL:CDB08457.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
thioredoxin
L3_121_363G1_scaffold_3_30
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39244..41568
DNA (2325bp) protein (775aa)
Putative alpha-1 2-mannosidase n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FHP6_9PORP
Putative alpha-1 2-mannosidase {ECO:0000313|EMBL:CDB08456.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
glycoside hydrolase
Displaying items 1-30 of 185 in total

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