ggKbase home page

L3_121_363G1_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_53_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173..733
DNA (561bp) protein (187aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Phosphoribosylglycinamide formyltransferase n=3 Tax=Parabacteroides RepID=K5YWZ1_9PORP
phosphoribosylglycinamide formyltransferase
L3_121_363G1_scaffold_53_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(747..1856)
DNA (1110bp) protein (370aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019216}; EC=1.1.1.290 {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019244};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Erythronate-4-phosphate dehydrogenase n=2 Tax=Bacteroidales RepID=K6APK7_9PORP
erythronate-4-phosphate dehydrogenase
L3_121_363G1_scaffold_53_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2322..4439
DNA (2118bp) protein (706aa)
Peptidase C10 family (EC:3.4.22.10)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AP21_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25531.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_121_363G1_scaffold_53_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4517..5053
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZF79_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS41403.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_121_363G1_scaffold_53_5
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5062..6261)
DNA (1200bp) protein (400aa)
Transporter, major facilitator family protein n=4 Tax=Parabacteroides RepID=E1Z1C9_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFK60404.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
transmembrane transport protein
L3_121_363G1_scaffold_53_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6371..8092)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ABY6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25534.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
transcriptional regulator
L3_121_363G1_scaffold_53_7
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8383..10557
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6APL2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25535.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_53_8
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10578..13103)
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AP27_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25536.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_53_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13100..13978)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZF84_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25537.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_53_10
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14139..15554
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BBU9_9PORP
histidine kinase
L3_121_363G1_scaffold_53_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15551..16234
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ABZ1_9PORP
two-component system response regulator
Response regulator {ECO:0000313|EMBL:KDS71020.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_121_363G1_scaffold_53_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16319..16924
DNA (606bp) protein (202aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=D0TJK4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB50169.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_121_363G1_scaffold_53_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16924..17979
DNA (1056bp) protein (352aa)
Glycosyltransferase family 9 n=2 Tax=Parabacteroides RepID=A6LFR8_PARD8
glycosyltransferase family protein
Glycosyltransferase 9 family protein {ECO:0000313|EMBL:KDS71022.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_121_363G1_scaffold_53_14
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17963..18697
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=D0TJK6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY81592.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_121_363G1_scaffold_53_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18704..19567
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BBV5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS71024.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_121_363G1_scaffold_53_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19581..20645)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6ABZ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25544.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycosyl transferase family protein
L3_121_363G1_scaffold_53_17
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20669..21802)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6APM3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83233.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
mannosyltransferase
L3_121_363G1_scaffold_53_18
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21859..22494)
DNA (636bp) protein (212aa)
Ribonuclease H n=2 Tax=Parabacteroides RepID=C7XFH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25546.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
ribonuclease H-like protein
L3_121_363G1_scaffold_53_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22481..23278)
DNA (798bp) protein (266aa)
Polysaccharide deacetylase n=4 Tax=Parabacteroides RepID=C7XFH7_9PORP
polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:KDS71028.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_121_363G1_scaffold_53_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23288..24004)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BBV9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25548.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycosyl transferase family protein
L3_121_363G1_scaffold_53_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24010..25122)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ABZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25549.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_53_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25297..27357
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6APM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25550.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_53_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27438..27959
DNA (522bp) protein (174aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Shikimate kinase n=1 Tax=Parabacteroides sp. D25 RepID=K6AP42_9PORP
shikimate kinase
L3_121_363G1_scaffold_53_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27963..29174
DNA (1212bp) protein (404aa)
Alanine dehydrogenase n=5 Tax=Bacteroidales RepID=K6ASY3_9PORP
Alanine dehydrogenase {ECO:0000313|EMBL:EKN29671.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
alanine dehydrogenase
L3_121_363G1_scaffold_53_25
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29263..31116
DNA (1854bp) protein (618aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Parabacteroides sp. D25 RepID=K6BBW4_9PORP
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EKN25553.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
oxidoreductase
L3_121_363G1_scaffold_53_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31120..32136
DNA (1017bp) protein (339aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=4 Tax=Bacteroidales RepID=C7XFH0_9PORP
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EEU49342.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
2-oxoglutarate ferredoxin oxidoreductase subunit beta
L3_121_363G1_scaffold_53_27
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32551..34158
DNA (1608bp) protein (536aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Phosphoenolpyruvate carboxykinase [ATP] n=9 Tax=Bacteroidales RepID=PCKA_PARD8
L3_121_363G1_scaffold_53_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34348..35448
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AP47_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25556.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_53_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35509..37047
DNA (1539bp) protein (513aa)
Magnesium chelatase subunit ChlI n=3 Tax=Parabacteroides RepID=A6LFQ2_PARD8
magnesium chelatase subunit ChlI
Mg chelatase-like protein {ECO:0000313|EMBL:EKN25557.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_121_363G1_scaffold_53_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37341..38189)
DNA (849bp) protein (283aa)
AraC family transcriptional regulator n=4 Tax=Bacteroidales RepID=D7IX32_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN18834.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
transcriptional regulator
Displaying items 1-30 of 95 in total

View Taxonomy