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L3_121_363G1_scaffold_59

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Displaying items 1-30 of 203 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_59_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)
Transposase DDE domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6K4_9FIRM
Transposase DDE domain.
Transposase DDE domain {ECO:0000313|EMBL:CBL26866.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(433..1119)
DNA (687bp) protein (229aa)
Transposase DDE domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6K4_9FIRM
Transposase DDE domain.
Transposase DDE domain {ECO:0000313|EMBL:CBL26866.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1334..1996
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6L4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26876.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2660..3649
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6L6_9FIRM
conserved hypothetical protein (putative transposase or invertase)
Uncharacterized protein {ECO:0000313|EMBL:CBL26878.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3540..3947)
DNA (408bp) protein (136aa)
hypothetical protein, partial n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003645A78
Multimeric flavodoxin WrbA
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:CBK94674.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_121_363G1_scaffold_59_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4105..4275
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17260.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_121_363G1_scaffold_59_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4353..5618
DNA (1266bp) protein (422aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PFG0_9FIRM
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CDC17261.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_59_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5645..7447
DNA (1803bp) protein (601aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q5N1_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDC17262.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_59_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7989..9008
DNA (1020bp) protein (340aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYQ1_9FIRM
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CDC17263.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type uncharacterized transport system, periplasmic component
L3_121_363G1_scaffold_59_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9035..9922
DNA (888bp) protein (296aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6M2_9FIRM
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:CBL26884.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9909..10682
DNA (774bp) protein (258aa)
ABC-type uncharacterized transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1D9_9FIRM
ABC-type uncharacterized transport system ATPase component {ECO:0000313|EMBL:CDC17265.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type uncharacterized transport system, ATPase component
L3_121_363G1_scaffold_59_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10753..11031)
DNA (279bp) protein (93aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6M4_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL26886.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11602..12879
DNA (1278bp) protein (426aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CBL26887.1}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CBL26887.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Homoserine dehydrogenase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6M5_9FIRM
L3_121_363G1_scaffold_59_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12901..13749
DNA (849bp) protein (283aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Thymidylate synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYQ7_9FIRM
ThyA; thymidylate synthase
L3_121_363G1_scaffold_59_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13762..14250
DNA (489bp) protein (163aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194, ECO:0000313|EMBL:CBL26888.1}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194, ECO:0000313|EMBL:CBL26888.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Dihydrofolate reductase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6M6_9FIRM
L3_121_363G1_scaffold_59_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14297..15379
DNA (1083bp) protein (361aa)
ABC-type metal ion transport system periplasmic component/surface adhesin n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1E4_9FIRM
ABC-type metal ion transport system periplasmic component/surface adhesin {ECO:0000313|EMBL:CDC17270.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_121_363G1_scaffold_59_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15379..16089
DNA (711bp) protein (237aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC-type Mn/Zn transport systems, ATPase component {ECO:0000313|EMBL:CBL26890.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBL26890.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
ABC-type Mn/Zn transport systems, ATPase component n=2 Tax=Clostridiales RepID=D4M6M8_9FIRM
L3_121_363G1_scaffold_59_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16082..16906
DNA (825bp) protein (275aa)
ABC-type Mn2+/Zn2+ transport systems, permease components n=2 Tax=Clostridiales RepID=D4M6M9_9FIRM
ABC-type Mn2+/Zn2+ transport systems, permease components
ABC-type Mn2+/Zn2+ transport systems permease components {ECO:0000313|EMBL:CDC17272.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_59_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17162..18880
DNA (1719bp) protein (573aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYR1_9FIRM
L3_121_363G1_scaffold_59_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18920..19429
DNA (510bp) protein (170aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Clostridiales RepID=D4M6N1_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDC17274.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_59_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19521..20852)
DNA (1332bp) protein (444aa)
Mg2+ transporter (MgtE) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6N2_9FIRM
Mg2+ transporter (mgtE)
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21379..21741)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6PFH3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC17276.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_59_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21738..22091)
DNA (354bp) protein (118aa)
Coenzyme PQQ synthesis protein D (PqqD) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6N4_9FIRM
Coenzyme PQQ synthesis protein D (PqqD).
Coenzyme PQQ synthesis protein D (PqqD) {ECO:0000313|EMBL:CBL26896.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_59_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22096..24051)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17278.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_121_363G1_scaffold_59_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24388..25146
DNA (759bp) protein (253aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P990_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDC17279.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_121_363G1_scaffold_59_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25194..26069
DNA (876bp) protein (292aa)
33 kDa chaperonin n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1F2_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Disulfide bond chaperones of the HSP33 family
L3_121_363G1_scaffold_59_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26129..28045
DNA (1917bp) protein (639aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PFI0_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:CDC17281.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_59_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28153..29169
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q5P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17282.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
molybdopterin binding domain-containing protein
L3_121_363G1_scaffold_59_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29516..30562
DNA (1047bp) protein (349aa)
Putative transposase, YhgA-like n=2 Tax=Clostridiales RepID=D4M6N8_9FIRM
Putative transposase, YhgA-like.
Putative transposase YhgA-like {ECO:0000313|EMBL:CDC17283.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_59_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30585..31559
DNA (975bp) protein (325aa)
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6N9_9FIRM
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:CBL26901.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying items 1-30 of 203 in total

View Taxonomy