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L3_121_363G1_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_75_1
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(101..826)
DNA (726bp) protein (242aa)
Transcriptional regulator, LuxR family n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WP54_EGGLE
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV54943.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_121_363G1_scaffold_75_2
unknown

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comp(830..988)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_121_363G1_scaffold_75_3
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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1290..3065
DNA (1776bp) protein (592aa)
Amidohydrolase 3 n=2 Tax=Eggerthella RepID=C8WGL8_EGGLE
amidohydrolase
Amidohydrolase 3 {ECO:0000313|EMBL:ACV55259.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_121_363G1_scaffold_75_4
unknown

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comp(3321..3518)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_121_363G1_scaffold_75_5
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3885..4325
DNA (441bp) protein (147aa)
Dihydroxyacetone kinase, phosphotransfer subunit n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q5S7_CATAD
Uncharacterized protein {ECO:0000313|EMBL:KJK56618.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
dihydroxyacetone kinase, phosphotransfer subunit
L3_121_363G1_scaffold_75_6
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4640..6760
DNA (2121bp) protein (707aa)
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHL8_9ACTN
Formate acetyltransferase {ECO:0000313|EMBL:EGX71772.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
L3_121_363G1_scaffold_75_7
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6943..7194
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHL7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX71771.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
formate C-acetyltransferase glycine radical
L3_121_363G1_scaffold_75_8
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7447..8583)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHA6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67125.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
citrate transporter
L3_121_363G1_scaffold_75_9
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9112..10416
DNA (1305bp) protein (435aa)
cysD; putative O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBA5_9ACTN
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EEA90423.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_121_363G1_scaffold_75_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10631..12310
DNA (1680bp) protein (560aa)
ATP-binding cassette protein ChvD family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFY5_9ACTN
ATP-binding cassette protein ChvD family {ECO:0000313|EMBL:CDA35464.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter ATP-binding protein
L3_121_363G1_scaffold_75_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(12467..13981)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBA7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90425.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_121_363G1_scaffold_75_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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14507..14812
DNA (306bp) protein (102aa)
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA55_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEP44364.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_121_363G1_scaffold_75_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14788..15078
DNA (291bp) protein (97aa)
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA55_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEP44364.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_121_363G1_scaffold_75_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15336..15968
DNA (633bp) protein (211aa)
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA55_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEP44364.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Cro/CI family transcriptional regulator
L3_121_363G1_scaffold_75_15
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16092..16853)
DNA (762bp) protein (254aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8I6_9ACTN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEA91414.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
3-oxoacyl-ACP reductase
L3_121_363G1_scaffold_75_16
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17416..17988
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHC0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX66968.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
transcriptional regulator
L3_121_363G1_scaffold_75_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19073..19822
DNA (750bp) protein (250aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Collinsella RepID=A4E921_9ACTN
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDA36429.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
short-chain dehydrogenase/reductase SDR
L3_121_363G1_scaffold_75_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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19934..20938
DNA (1005bp) protein (335aa)
Putative 2-keto-3-deoxygluconate transporter n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC32_9ACTN
Putative 2-keto-3-deoxygluconate transporter {ECO:0000313|EMBL:CDA36430.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
2-keto-3-deoxygluconate permease
L3_121_363G1_scaffold_75_19
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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21317..23560
DNA (2244bp) protein (748aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHB9_9ACTN
L3_121_363G1_scaffold_75_20
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23793..24683
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHB7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX66965.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
FocA; formate/nitrite family of transporter
L3_121_363G1_scaffold_75_21
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25019..25345)
DNA (327bp) protein (109aa)
UPF0145 protein COLINT_03042 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAF0_9ACTN
UPF0145 protein COLINT_03042 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_121_363G1_scaffold_75_22
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25663..27528
DNA (1866bp) protein (622aa)
Putative peptidase C11 family protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R8Y3_9FIRM
Putative peptidase C11 family protein {ECO:0000313|EMBL:CDF46180.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
putative peptidase C11 family protein
L3_121_363G1_scaffold_75_23
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28041..28544
DNA (504bp) protein (168aa)
Putative high molecular weight rubredoxin n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N5_9ACTN
Putative high molecular weight rubredoxin {ECO:0000313|EMBL:EEP44413.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
flavin reductase domain-containing FMN-binding protein
L3_121_363G1_scaffold_75_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28854..31340
DNA (2487bp) protein (829aa)
uvrA; excinuclease ABC subunit A (EC:3.6.3.28)
Putative excinuclease ABC A subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC81_9ACTN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30915.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_121_363G1_scaffold_75_25
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31768..33378
DNA (1611bp) protein (537aa)
D-lactate dehydrogenase (EC:1.1.2.4)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WLC0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68443.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
L3_121_363G1_scaffold_75_26
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33381..34175
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WLC1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68444.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
electron transfer flavoprotein subunit alpha/beta-like protein
L3_121_363G1_scaffold_75_27
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34175..35383
DNA (1209bp) protein (403aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7DAA3_9ACTN
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:CDD86372.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
electron transfer flavoprotein subunit alpha-like protein
L3_121_363G1_scaffold_75_28
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35546..36430
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WLC6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68449.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_121_363G1_scaffold_75_29
Alteromonas marina, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(36549..37166)
DNA (618bp) protein (206aa)
Acetyltransferase (Isoleucine patch superfamily) protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=J9Y8Q5_ALTMA
acetyltransferase
Maltose acetyltransferase {ECO:0000313|EMBL:KHT57893.1}; TaxID=203795 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas marina.;"
L3_121_363G1_scaffold_75_30
Listeria ivanovii, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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37288..37926
DNA (639bp) protein (213aa)
Ethanolamine utilization cobalamin adenosyltransferase n=1 Tax=Listeria ivanovii FSL F6-596 RepID=E3ZFI7_LISIV
ethanolamine utilization cobalamin adenosyltransferase
Ethanolamine utilization cobalamin adenosyltransferase {ECO:0000313|EMBL:AIS59571.1}; TaxID=202752 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria ivanovii subsp. londoniensis.;"
Displaying items 1-30 of 89 in total

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