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L3_121_363G1_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_78_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1108
DNA (1107bp) protein (369aa)
Mobilization protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L0B2_BACV8
mobilization protein
Mobilization protein {ECO:0000313|EMBL:ABR39126.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_121_363G1_scaffold_78_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1433..2266)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L0B1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39125.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_121_363G1_scaffold_78_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2452..3114
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L0B0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39124.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_121_363G1_scaffold_78_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3207..3398)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7A9L1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88319.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_363G1_scaffold_78_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3491..4570
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=R6WSB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14228.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
mannose-1-phosphate guanylyltransferase
L3_121_363G1_scaffold_78_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4853..5854
DNA (1002bp) protein (334aa)
GSCFA family protein n=5 Tax=Parabacteroides RepID=A7A9L5_9PORP
GSCFA family protein {ECO:0000313|EMBL:EEC98252.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_121_363G1_scaffold_78_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5875..8340
DNA (2466bp) protein (822aa)
Alanine racemase {ECO:0000313|EMBL:EEC98254.1}; EC=5.1.1.1 {ECO:0000313|EMBL:EEC98254.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Alanine racemase n=3 Tax=Parabacteroides RepID=A7A9L6_9PORP
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
L3_121_363G1_scaffold_78_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8450..9307
DNA (858bp) protein (286aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=6 Tax=Parabacteroides RepID=A7A9L7_9PORP
enoyl-(acyl carrier protein) reductase
L3_121_363G1_scaffold_78_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9408..10016
DNA (609bp) protein (203aa)
Sua5/YciO/YrdC/YwlC family protein n=4 Tax=Parabacteroides RepID=A7A9L8_9PORP
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EDN88325.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_363G1_scaffold_78_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10031..11356
DNA (1326bp) protein (442aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=K5ZEC4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11884.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dGTP triphosphohydrolase
L3_121_363G1_scaffold_78_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11353..12363)
DNA (1011bp) protein (337aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Putative ribosome biogenesis GTPase RsgA n=3 Tax=Parabacteroides RepID=A7A9M0_9PORP
ribosome-associated GTPase
L3_121_363G1_scaffold_78_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12368..12931)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=5 Tax=Parabacteroides RepID=A7A9M1_9PORP
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
frr; ribosome recycling factor
L3_121_363G1_scaffold_78_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13041..14162)
DNA (1122bp) protein (374aa)
Transporter, major facilitator family protein n=2 Tax=Parabacteroides RepID=B7B5N0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14027.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glucose/galactose transporter
L3_121_363G1_scaffold_78_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14211..15074)
DNA (864bp) protein (288aa)
Kinase, PfkB family n=2 Tax=Parabacteroides merdae RepID=A7A9M3_9PORP
Kinase, PfkB family {ECO:0000313|EMBL:EDN88330.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
fructokinase
L3_121_363G1_scaffold_78_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15102..16787)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BFN0_9PORP
Putative fructan beta-fructosidase {ECO:0000313|EMBL:CDD11879.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative glycosylhydrolase
L3_121_363G1_scaffold_78_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16756..17466)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Uridylate kinase n=2 Tax=Parabacteroides johnsonii RepID=B7B5N3_9PORP
pyrH; uridylate kinase
L3_121_363G1_scaffold_78_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17843..18067
DNA (225bp) protein (75aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7A9M6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88333.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_363G1_scaffold_78_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18316..19614)
DNA (1299bp) protein (433aa)
Excinuclease ABC, A subunit n=2 Tax=Parabacteroides merdae RepID=A7A9M8_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
excinuclease ABC subunit A
L3_121_363G1_scaffold_78_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19566..21068)
DNA (1503bp) protein (501aa)
Excinuclease ABC A subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WR63_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
excinuclease ABC subunit A
L3_121_363G1_scaffold_78_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21204..24431)
DNA (3228bp) protein (1076aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BG79_9PORP
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDN88337.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
family 2 glycoside hydrolase
L3_121_363G1_scaffold_78_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24614..26203
DNA (1590bp) protein (530aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BFN4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11855.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_363G1_scaffold_78_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26216..27067
DNA (852bp) protein (284aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY36_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD11854.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L3_121_363G1_scaffold_78_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27545..28672
DNA (1128bp) protein (376aa)
Clostripain family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WL17_9PORP
Clostripain family {ECO:0000313|EMBL:CDD11853.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
clostripain-like protein
L3_121_363G1_scaffold_78_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28681..31050)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9N4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88341.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_363G1_scaffold_78_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31183..32193
DNA (1011bp) protein (337aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Aspartate-semialdehyde dehydrogenase n=2 Tax=Parabacteroides RepID=K5ZRB8_9PORP
aspartate-semialdehyde dehydrogenase
L3_121_363G1_scaffold_78_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32312..33202)
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YJZ6_9PORP
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDD11850.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dTDP-4-dehydrorhamnose reductase
L3_121_363G1_scaffold_78_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33202..34422)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AEC6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14073.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_121_363G1_scaffold_78_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35203..36567
DNA (1365bp) protein (455aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=3 Tax=Parabacteroides RepID=A7A9P0_9PORP
L3_121_363G1_scaffold_78_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36708..37118)
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7A9P1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11846.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_363G1_scaffold_78_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37308..37520)
DNA (213bp) protein (71aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7A9P3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88350.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
XRE family transcriptional regulator
Displaying items 1-30 of 102 in total

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