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L3_121_363G1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_85_1
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..985
DNA (984bp) protein (328aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
DNA-directed RNA polymerase subunit alpha n=6 Tax=Bacteroidales RepID=RPOA_PARD8
L3_121_363G1_scaffold_85_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


993..1478
DNA (486bp) protein (162aa)
50S ribosomal protein L17 n=6 Tax=Bacteroidales RepID=RL17_PARD8
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_121_363G1_scaffold_85_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1645..2127)
DNA (483bp) protein (161aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LEG3_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS71917.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_121_363G1_scaffold_85_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2343..3626
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Parabacteroides sp. D25 RepID=K6BRD2_9PORP
L3_121_363G1_scaffold_85_5
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3759..4118)
DNA (360bp) protein (120aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=R6JJT7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50307.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_121_363G1_scaffold_85_6
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4099..5100)
DNA (1002bp) protein (334aa)
Kelch repeat protein n=6 Tax=Bacteroidales RepID=C7XBL6_9PORP
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CDB50306.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_121_363G1_scaffold_85_7
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5372..6688
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XBL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30731.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_8
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6675..7880
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZUU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30732.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_9
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7970..8407)
DNA (438bp) protein (146aa)
LytTr DNA-binding domain protein n=4 Tax=Bacteroidales RepID=D7IRD7_9BACE
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CDB50303.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
transcriptional regulator
L3_121_363G1_scaffold_85_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8531..9292)
DNA (762bp) protein (254aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AM22_9PORP
Response regulator {ECO:0000313|EMBL:KDS71909.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
two-component system response regulator
L3_121_363G1_scaffold_85_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9289..10470)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B4I3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30735.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
two-component system sensor protein histidine kinase
L3_121_363G1_scaffold_85_12
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10615..12273
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B3V3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30736.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12399..14468
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZUX2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30737.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14375..14680)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1Z0E6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23695.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_121_363G1_scaffold_85_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15120..15467)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=8 Tax=Bacteroidales RepID=RL19_PARD8
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_121_363G1_scaffold_85_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15605..16621)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B4J3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30740.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16627..19263)
DNA (2637bp) protein (879aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B3W2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30741.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_18
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19378..22377
DNA (3000bp) protein (1000aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZUX5_9PORP
glycoside hydrolase family protein
L3_121_363G1_scaffold_85_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22424..23452
DNA (1029bp) protein (343aa)
L-threonine-O-3-phosphate decarboxylase, putative n=4 Tax=Bacteroidales RepID=A6LEE8_PARD8
L-threonine-O-3-phosphate decarboxylase
L-threonine-O-3-phosphate decarboxylase, putative {ECO:0000313|EMBL:ABR44062.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_121_363G1_scaffold_85_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23504..24067)
DNA (564bp) protein (188aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroidales RepID=A6LEE7_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:KDS71899.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_121_363G1_scaffold_85_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24322..25269
DNA (948bp) protein (316aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroidales RepID=C7XBN6_9PORP
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:EFI08526.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_121_363G1_scaffold_85_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25318..28761
DNA (3444bp) protein (1148aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroidales RepID=K6B3X0_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN30746.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28782..30413
DNA (1632bp) protein (544aa)
Outer membrane protein n=3 Tax=Bacteroidales RepID=D7IRF1_9BACE
hypothetical protein
Outer membrane protein {ECO:0000313|EMBL:EFI08528.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_121_363G1_scaffold_85_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30497..33256
DNA (2760bp) protein (920aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BRI1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30748.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycoside hydrolase
L3_121_363G1_scaffold_85_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33361..33531)
DNA (171bp) protein (57aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=D0THP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFK60730.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_121_363G1_scaffold_85_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33669..34406
DNA (738bp) protein (246aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Acyltransferase n=4 Tax=Parabacteroides RepID=C7XBP1_9PORP
1-acyl-sn-glycerol-3-phosphate acyltransferase
L3_121_363G1_scaffold_85_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34416..35903)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6A9Y2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30751.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_85_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35963..36964)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZUY2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30752.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
lysophospholipase
L3_121_363G1_scaffold_85_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37187..37948
DNA (762bp) protein (254aa)
Response regulator receiver domain protein n=3 Tax=Parabacteroides RepID=C7XBP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30753.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
two-component system response regulator
L3_121_363G1_scaffold_85_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38202..39341)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZD89_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24792.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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