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L3_121_363G1_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_102_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

170..421
DNA (252bp) protein (84aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=I3WKI1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44105.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_121_363G1_scaffold_102_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(660..1190)
DNA (531bp) protein (177aa)
Nitroreductase family protein n=2 Tax=Bifidobacterium bifidum RepID=E3ERE6_BIFBS
nfrA; NADPH-dependent oxidoreductase
Nitroreductase family protein {ECO:0000313|EMBL:EKE50066.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_121_363G1_scaffold_102_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1448..1900)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05392.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_121_363G1_scaffold_102_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1949..2638
DNA (690bp) protein (230aa)
Phosphoglycerate mutase family protein n=5 Tax=Bifidobacterium RepID=E3ERE4_BIFBS
phoE; putative phosphoglycerate mutase
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ADO53948.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_363G1_scaffold_102_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2939..3961)
DNA (1023bp) protein (341aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DSS2_BIFBI
LacI-type transcriptional regulator {ECO:0000313|EMBL:KFI44100.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
LacI-type transcriptional regulator
L3_121_363G1_scaffold_102_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4294..6426
DNA (2133bp) protein (711aa)
alkaline phosphatase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976FEA
alkaline phosphatase
Alkaline phosphatase {ECO:0000313|EMBL:ADO53945.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_363G1_scaffold_102_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6804..8687
DNA (1884bp) protein (628aa)
dnaK; molecular chaperone DnaK (EC:3.6.1.3)
Chaperone protein DnaK n=7 Tax=Bifidobacterium bifidum RepID=E3ERE0_BIFBS
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_121_363G1_scaffold_102_8
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8690..9394
DNA (705bp) protein (235aa)
Protein GrpE n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCZ1_9BIFI
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
grpE; molecular chaperone GrpE
L3_121_363G1_scaffold_102_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9852..10859
DNA (1008bp) protein (336aa)
DnaJ-class molecular chaperone n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0G1_BIFBP
dnaJ; DnaJ-class molecular chaperone
DnaJ-class molecular chaperone {ECO:0000313|EMBL:CDB22226.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_121_363G1_scaffold_102_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10954..11466
DNA (513bp) protein (171aa)
Heat shock regulatory protein hspR n=5 Tax=Bifidobacterium RepID=E3ERD6_BIFBS
hspR; putative heat shock protein
HspR heat shock response regulator {ECO:0000313|EMBL:CDB22227.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_121_363G1_scaffold_102_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11798..14302
DNA (2505bp) protein (835aa)
exo-alpha-sialidase (EC:3.2.1.18)
BNR/Asp-box repeat protein n=2 Tax=Bifidobacterium bifidum RepID=E4VB00_BIFBI
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EFR50765.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_121_363G1_scaffold_102_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14614..19962
DNA (5349bp) protein (1783aa)
exo-alpha-sialidase (EC:3.2.1.18)
Exo-alpha-sialidase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GKU0_9BIFI
Exo-alpha-sialidase {ECO:0000313|EMBL:CDB22229.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_121_363G1_scaffold_102_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20195..20980
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQQ3_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53937.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_363G1_scaffold_102_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21477..22175)
DNA (699bp) protein (233aa)
DedA integral membrane protein n=2 Tax=Bifidobacterium RepID=K2MC78_BIFBI
hypothetical protein
DedA integral membrane protein {ECO:0000313|EMBL:EKF14892.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_121_363G1_scaffold_102_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22445..23446
DNA (1002bp) protein (334aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
S-adenosylmethionine-dependent methyltransferase, YraL family n=3 Tax=Bifidobacterium bifidum RepID=E4VB05_BIFBI
uroporphyrin-III C/tetrapyrrole
L3_121_363G1_scaffold_102_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23448..23879)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=E4VB06_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44088.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_121_363G1_scaffold_102_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23990..24820)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WKG3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05376.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_121_363G1_scaffold_102_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24970..26832
DNA (1863bp) protein (621aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Methionine--tRNA ligase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0F2_BIFBP
L3_121_363G1_scaffold_102_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27027..27521
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQP7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53931.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_363G1_scaffold_102_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28575..30197
DNA (1623bp) protein (541aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQP5_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53929.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_363G1_scaffold_102_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30373..31332
DNA (960bp) protein (320aa)
Hydrolase, TatD family n=3 Tax=Bifidobacterium bifidum RepID=E4VB14_BIFBI
Sec-independent protein {ECO:0000313|EMBL:EKE51083.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
tadD; sec-independent protein
L3_121_363G1_scaffold_102_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31496..33958
DNA (2463bp) protein (821aa)
Probable potassium transport system protein kup n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BX42_BIFBI
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
K+ transporter
L3_121_363G1_scaffold_102_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34539..35009
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CFH5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82768.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_121_363G1_scaffold_102_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35177..36043
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VB17_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50782.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
putative glutamine amido transferase
L3_121_363G1_scaffold_102_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36247..36993
DNA (747bp) protein (249aa)
HD domain protein n=3 Tax=Bifidobacterium bifidum RepID=E4VB18_BIFBI
HD domain protein {ECO:0000313|EMBL:EFR50783.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
metal dependent phosphohydrolase
L3_121_363G1_scaffold_102_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37071..38390)
DNA (1320bp) protein (440aa)
sugar ABC transporter (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CE10_BIFBI
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAQ98971.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI82765.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_121_363G1_scaffold_102_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38387..39820)
DNA (1434bp) protein (478aa)
SalY-type ABC antimicrobial peptide transportsystem permease component n=2 Tax=Bifidobacterium bifidum RepID=K2I864_BIFBI
ABC transporter permease component {ECO:0000313|EMBL:BAQ98970.1}; Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI82764.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
SalY-type ABC antimicrobial peptide transportsystem permease component
L3_121_363G1_scaffold_102_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40304..42460
DNA (2157bp) protein (719aa)
Methyl-accepting chemotaxis protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKF0_BIFBI
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AFL05363.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_121_363G1_scaffold_102_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42508..42732)
DNA (225bp) protein (75aa)
Glycosil transferase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKE9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53920.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_121_363G1_scaffold_102_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43049..44728
DNA (1680bp) protein (560aa)
Riboflavin-specific deaminase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUB5_BIFBI
Riboflavin-specific deaminase {ECO:0000313|EMBL:EKE51093.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
riboflavin-specific deaminase
Displaying items 1-30 of 138 in total

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