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L3_121_363G1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_110_1
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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80..883
DNA (804bp) protein (268aa)
Site-specific recombinase phage integrase family n=1 Tax=Tannerella sp. CAG:51 RepID=R7DHA7_9PORP
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDD89964.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
integrase
L3_121_363G1_scaffold_110_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(910..2028)
DNA (1119bp) protein (373aa)
Putative type I restriction enzyme S.BthVORF4518AP n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q89Z57_BACTN
type I restriction enzyme EcoAI protein
Putative type I restriction enzyme S.BthVORF4518AP {ECO:0000313|EMBL:AAO79625.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_363G1_scaffold_110_3
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2297..4111)
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00036B5962
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF12530.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_121_363G1_scaffold_110_4
Prevotella sp. CAG:592, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4224..5279)
DNA (1056bp) protein (352aa)
Putative cytoplasmic protein n=1 Tax=Prevotella sp. CAG:592 RepID=R6WDJ9_9BACT
Putative cytoplasmic protein {ECO:0000313|EMBL:CDD04914.1}; TaxID=1262931 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:592.;"
hypothetical protein
L3_121_363G1_scaffold_110_5
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5281..6717)
DNA (1437bp) protein (479aa)
N-6 DNA Methylase n=1 Tax=Tannerella sp. CAG:118 RepID=R5IR97_9PORP
N-6 DNA Methylase {ECO:0000313|EMBL:CCY39392.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
restriction endonuclease subunit M
L3_121_363G1_scaffold_110_6
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6724..9429)
DNA (2706bp) protein (902aa)
Type III restriction enzyme, res subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEN9_9BACT
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:EFB34831.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
type I restriction enzyme EcoKI R protein
L3_121_363G1_scaffold_110_7
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9502..9708)
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=1 Tax=Tannerella sp. CAG:51 RepID=R7DJ18_9PORP
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF12534.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_121_363G1_scaffold_110_8
unknown

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comp(10021..10209)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_121_363G1_scaffold_110_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10617..11612
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002895184
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD63704.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
L3_121_363G1_scaffold_110_10
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11602..12495
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Paenibacillus polymyxa RepID=I7IRH0_PAEPO
M1_3664; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO57444.1}; TaxID=886882 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa).;"
L3_121_363G1_scaffold_110_11
Prevotella intermedia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12691..13158
DNA (468bp) protein (156aa)
Transposase, IS4 family n=1 Tax=Prevotella intermedia (strain 17) RepID=I1YUL0_PREI7
transposase, IS4 family
Transposase, IS4 family {ECO:0000313|EMBL:AFJ08515.1}; TaxID=246198 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella intermedia (strain 17).;"
L3_121_363G1_scaffold_110_12
Prevotella sp. CAG:1185, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13345..13575
DNA (231bp) protein (77aa)
Transposase IS4 family n=1 Tax=Prevotella sp. CAG:1185 RepID=R5M925_9BACT
Transposase IS4 family {ECO:0000313|EMBL:CCY81637.1}; TaxID=1262921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1185.;"
transposase, IS4 family
L3_121_363G1_scaffold_110_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13958..15874
DNA (1917bp) protein (639aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BQK6_9PORP
two-component regulator sensor kinase
L3_121_363G1_scaffold_110_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15968..18274
DNA (2307bp) protein (769aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZTY8_9PORP
two-component regulator sensor kinase
L3_121_363G1_scaffold_110_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18277..19527)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B2Y7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30446.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
beta-lactamase induction signal transducer
L3_121_363G1_scaffold_110_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19548..20333)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B3M6_9PORP
Carbon-nitrogen hydrolase family protein {ECO:0000313|EMBL:KDS58139.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
amidohydrolase
L3_121_363G1_scaffold_110_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20489..21004)
DNA (516bp) protein (172aa)
Acyltransferase family protein n=5 Tax=Bacteroidales RepID=A6LDH3_PARD8
acyltransferase
Acyltransferase family protein {ECO:0000313|EMBL:KDS58113.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_121_363G1_scaffold_110_18
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21040..21330)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BQK1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30443.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_110_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21459..23117
DNA (1659bp) protein (553aa)
Starch synthase n=2 Tax=Bacteroidales RepID=D0TGR8_9BACE
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:KDS58182.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
glycosyltransferase family alpha-glycosyltransferase
L3_121_363G1_scaffold_110_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23190..25760
DNA (2571bp) protein (857aa)
Alpha-glucan phosphorylase n=1 Tax=Parabacteroides sp. D25 RepID=K6B2Y3_9PORP
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EKN30441.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycosyltransferase family alpha-glucan phosphorylase
L3_121_363G1_scaffold_110_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25977..27359)
DNA (1383bp) protein (461aa)
Outer membrane protein n=2 Tax=Bacteroidales RepID=D7IS51_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN30440.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
outer membrane protein
L3_121_363G1_scaffold_110_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27707..28876
DNA (1170bp) protein (390aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AQZ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30439.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
xylanase
L3_121_363G1_scaffold_110_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28890..29768
DNA (879bp) protein (293aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides RepID=C7XCG7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30438.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
transcriptional regulator
L3_121_363G1_scaffold_110_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29852..30316
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZTX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30437.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_110_25
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30396..31349
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B2X8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30436.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_121_363G1_scaffold_110_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31437..32270
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B3L8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30435.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
formamidopyrimidine-DNA glycosylase
L3_121_363G1_scaffold_110_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32426..32833
DNA (408bp) protein (136aa)
DNA-binding helix-turn-helix protein n=5 Tax=Parabacteroides RepID=E1YTM9_9PORP
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EKN28288.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_121_363G1_scaffold_110_28
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34094..34684
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Imidazole glycerol phosphate synthase subunit HisH n=4 Tax=Parabacteroides RepID=A6LDI5_PARD8
hisH; imidazole glycerol phosphate synthase subunit HisH
L3_121_363G1_scaffold_110_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34681..35400
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Parabacteroides RepID=HIS4_PARD8
imidazole-4-carboxamide isomerase
L3_121_363G1_scaffold_110_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35418..36173
DNA (756bp) protein (252aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Parabacteroides RepID=HIS6_PARD8
imidazole glycerol phosphate synthase subunit HisF
Displaying items 1-30 of 133 in total

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