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L3_121_363G1_scaffold_120

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_120_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(133..1194)
DNA (1062bp) protein (354aa)
Stage II sporulation protein D n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNQ7_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:EHL75165.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
SpoIID/LytB domain
L3_121_363G1_scaffold_120_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1447..2811
DNA (1365bp) protein (455aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNQ8_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_121_363G1_scaffold_120_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2808..3644
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75167.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_363G1_scaffold_120_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3704..4357)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39036.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_121_363G1_scaffold_120_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4428..5327)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75169.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
helix-turn-helix type 11 domain-containing protein
L3_121_363G1_scaffold_120_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5422..5991)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR2_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:KJF39034.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
NUDIX hydrolase
L3_121_363G1_scaffold_120_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5997..6890)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75171.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_363G1_scaffold_120_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7143..8504
DNA (1362bp) protein (454aa)
N-acetyl sugar amidotransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR4_9FIRM
N-acetyl sugar amidotransferase {ECO:0000313|EMBL:EHL75172.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
pseA; LPS biosynthesis protein, PseA-like protein
L3_121_363G1_scaffold_120_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8518..9276
DNA (759bp) protein (253aa)
Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR5_9FIRM
Imidazoleglycerol phosphate synthase, cyclase subunit {ECO:0000313|EMBL:EHL75173.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hisF2; imidazole glycerol phosphate synthase subunit HisF
L3_121_363G1_scaffold_120_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9279..9935
DNA (657bp) protein (219aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR6_9FIRM
hisH; imidazole glycerol phosphate synthase subunit HisH
L3_121_363G1_scaffold_120_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10401..11405
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75175.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_121_363G1_scaffold_120_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11521..11796)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75176.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_363G1_scaffold_120_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12582..13757
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39026.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Protein of unknown function (DUF3048).
L3_121_363G1_scaffold_120_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13907..15112
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75200.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Protein of unknown function (DUF3048).
L3_121_363G1_scaffold_120_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15201..16370
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75201.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Protein of unknown function (DUF3048).
L3_121_363G1_scaffold_120_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16447..16803)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75202.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_363G1_scaffold_120_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16863..18743)
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Elongation factor 4 n=2 Tax=root RepID=G9RNU5_9FIRM
GTP-binding protein LepA
L3_121_363G1_scaffold_120_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19596..20648
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75204.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
G5 domain-containing protein
L3_121_363G1_scaffold_120_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20720..21022)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75205.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_363G1_scaffold_120_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21074..21937
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75206.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_121_363G1_scaffold_120_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21939..23363
DNA (1425bp) protein (475aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39021.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
membrane-fusion protein
L3_121_363G1_scaffold_120_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23376..24581
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75208.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type antimicrobial peptide transport system, permease component
L3_121_363G1_scaffold_120_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24849..27770
DNA (2922bp) protein (974aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV1_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EHL75209.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_121_363G1_scaffold_120_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27823..29193
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV2_9FIRM
2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:KJF39019.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_121_363G1_scaffold_120_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29302..30216)
DNA (915bp) protein (305aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
2-dehydropantoate 2-reductase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV3_9FIRM
hypothetical protein
L3_121_363G1_scaffold_120_26
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30590..31810
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39017.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
major facilitator superfamily protein
L3_121_363G1_scaffold_120_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32108..33550)
DNA (1443bp) protein (481aa)
Phage integrase family n=2 Tax=root RepID=D4K8X7_9FIRM
Phage integrase family.
Phage integrase family {ECO:0000313|EMBL:CBL01290.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_121_363G1_scaffold_120_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33553..33750)
DNA (198bp) protein (66aa)
Excisionase family DNA binding domain-containing protein n=3 Tax=Firmicutes RepID=F4XGN3_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERI81600.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_121_363G1_scaffold_120_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34128..34643)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72393.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_121_363G1_scaffold_120_30
unknown

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comp(35365..35469)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying items 1-30 of 77 in total

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