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L3_121_363G1_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_127_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..129)
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVI0_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL26225.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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401..2386
DNA (1986bp) protein (662aa)
UvrABC system protein B n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4R4_9FIRM
excinuclease ABC, B subunit
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2398..5241
DNA (2844bp) protein (948aa)
UvrABC system protein A n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4R5_9FIRM
excinuclease ABC, A subunit
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5531..6523
DNA (993bp) protein (331aa)
Rod shape-determining protein MreB n=2 Tax=Clostridiales RepID=D4M4R6_9FIRM
rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:CBL26228.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6662..8872
DNA (2211bp) protein (737aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSN9_9FIRM
L3_121_363G1_scaffold_127_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8995..9552
DNA (558bp) protein (186aa)
Predicted amidophosphoribosyltransferases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4R7_9FIRM
Predicted amidophosphoribosyltransferases
Predicted amidophosphoribosyltransferases {ECO:0000313|EMBL:CBL26229.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9600..9998
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4R8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26230.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9995..11164
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4R9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26231.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11230..12096
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6P0L6_9FIRM
conserved hypothetical protein TIGR00159
Uncharacterized protein {ECO:0000313|EMBL:CDC14234.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_127_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12093..13382
DNA (1290bp) protein (430aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4S1_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL26233.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13524..13799
DNA (276bp) protein (92aa)
Phosphotransferase System HPr (HPr) Family n=2 Tax=Clostridiales RepID=D4M4S2_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CDC14236.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_121_363G1_scaffold_127_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13856..14770
DNA (915bp) protein (305aa)
dTDP-glucose pyrophosphorylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4S3_9FIRM
dTDP-glucose pyrophosphorylase
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:CBL26235.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14791..16335
DNA (1545bp) protein (515aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4S4_9FIRM
cell envelope-related function transcriptional attenuator common domain
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CBL26236.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_14
unknown

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16542..16937
DNA (396bp) protein (132aa)

This feature has no annotations

L3_121_363G1_scaffold_127_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17012..19624
DNA (2613bp) protein (871aa)
Cell wall binding repeat domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNP9_CLOPF
FOG: Glucan-binding domain (YG repeat)
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EIA18241.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_121_363G1_scaffold_127_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19826..20398
DNA (573bp) protein (191aa)
Sporulation and spore germination n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4S5_9FIRM
Sporulation and spore germination.
Sporulation and spore germination {ECO:0000313|EMBL:CBL26237.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_17
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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20418..23327
DNA (2910bp) protein (970aa)
Putative cell wall binding repeat-containing domain protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PD03_9FIRM
Putative cell wall binding repeat-containing domain protein {ECO:0000313|EMBL:CDC07732.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
cell wall hydrolase/autolysin
L3_121_363G1_scaffold_127_18
unknown

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23361..23501
DNA (141bp) protein (47aa)

This feature has no annotations

L3_121_363G1_scaffold_127_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24468..26408
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22260.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted nucleoside-diphosphate sugar epimerases
L3_121_363G1_scaffold_127_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26413..27612
DNA (1200bp) protein (400aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4T1_9FIRM
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis {ECO:0000313|EMBL:CBL26243.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27653..28333
DNA (681bp) protein (227aa)
Sugar transferases involved in lipopolysaccharide synthesis n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4T2_9FIRM
Sugar transferases involved in lipopolysaccharide synthesis
Sugar transferases involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:CBL26244.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28354..29361
DNA (1008bp) protein (336aa)
Glycosyltransferases, probably involved in cell wall biogenesis n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4T3_9FIRM
Glycosyltransferases, probably involved in cell wall biogenesis
Glycosyltransferases, probably involved in cell wall biogenesis {ECO:0000313|EMBL:CBL26245.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_121_363G1_scaffold_127_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29376..30848
DNA (1473bp) protein (491aa)
Polysaccharide biosynthesis protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PN03_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC11117.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
virulence factor mvin superfamily
L3_121_363G1_scaffold_127_24
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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30841..31821
DNA (981bp) protein (327aa)
Capsular polysaccharide biosynthesis protein CpsI n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NRV3_9FIRM
Capsular polysaccharide biosynthesis protein CpsI {ECO:0000313|EMBL:CDC11114.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
galactosyl transferase
L3_121_363G1_scaffold_127_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31822..32616
DNA (795bp) protein (265aa)
LICD family protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NXW8_9FIRM
LICD family protein {ECO:0000313|EMBL:CDC11111.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
phosphorylcholine transferase LicD1
L3_121_363G1_scaffold_127_26
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32653..33462
DNA (810bp) protein (270aa)
LICD family protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLH7_9FIRM
LICD family protein {ECO:0000313|EMBL:EDP23202.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra ATCC 33270.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_121_363G1_scaffold_127_27
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33615..34448
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A4D5_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF86698.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
licD3; putative phosphotransferase
L3_121_363G1_scaffold_127_28
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

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34438..35556
DNA (1119bp) protein (373aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2QJ52_9BACL
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERK56244.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae ATCC 700627.;"
group 1 glycosyl transferase
L3_121_363G1_scaffold_127_29
Granulicatella elegans, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35557..37053
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BJK1_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW93254.1}; TaxID=626369 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella elegans ATCC 700633.;"
hypothetical protein
L3_121_363G1_scaffold_127_30
Granulicatella elegans, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37055..38119
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BJK2_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW93255.1}; TaxID=626369 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella elegans ATCC 700633.;"
hypothetical protein
Displaying items 1-30 of 131 in total

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