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L3_121_363G1_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_413_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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932..1414
DNA (483bp) protein (161aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=B7B6M3_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN11317.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA polymerase ECF-type sigma factor
L3_121_363G1_scaffold_413_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1471..2526
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11316.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
anti-sigma factor
L3_121_363G1_scaffold_413_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2708..6160
DNA (3453bp) protein (1151aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides sp. D13 RepID=C7XCT2_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU50632.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_121_363G1_scaffold_413_4
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6173..7822
DNA (1650bp) protein (550aa)
SusD family protein n=2 Tax=Parabacteroides RepID=E1YT48_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50019.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L3_121_363G1_scaffold_413_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7832..9172
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYP8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01445.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
oxidoreductase domain-containing protein
L3_121_363G1_scaffold_413_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9200..10534
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYP7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01444.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
glucose/galactose transporter
L3_121_363G1_scaffold_413_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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10537..11721
DNA (1185bp) protein (395aa)
N-acetylglucosamine-6-phosphate deacetylase id=3503800 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
N-acetylglucosamine-6-phosphate deacetylase
Tax=GWC2_Bacteroidetes_46_850_curated
L3_121_363G1_scaffold_413_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11733..12503
DNA (771bp) protein (257aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370C7AF
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:EIY59337.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_121_363G1_scaffold_413_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12518..13525
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYQ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01450.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
dehydrogenase
L3_121_363G1_scaffold_413_10
unknown

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13539..13697
DNA (159bp) protein (53aa)

This feature has no annotations

L3_121_363G1_scaffold_413_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13898..14710
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AH25_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85642.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
xylanase
L3_121_363G1_scaffold_413_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14723..16498
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XFE8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15031.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_363G1_scaffold_413_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16525..17409
DNA (885bp) protein (295aa)
Tat pathway signal sequence domain protein n=2 Tax=Parabacteroides merdae RepID=A7AH27_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN85644.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_363G1_scaffold_413_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17420..18556
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12735.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glycoside hydrolase family protein
L3_121_363G1_scaffold_413_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18663..19562
DNA (900bp) protein (300aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZMM8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15028.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transporter
L3_121_363G1_scaffold_413_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19972..22788)
DNA (2817bp) protein (939aa)
Peptidase M16 inactive domain protein n=2 Tax=Parabacteroides merdae RepID=A7AH30_9PORP
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EDN85647.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
zinc protease
L3_121_363G1_scaffold_413_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22985..24421
DNA (1437bp) protein (479aa)
Tat (Twin-arginine translocation) pathway signal sequence n=3 Tax=Parabacteroides RepID=K6BE54_9PORP
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDD11979.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dehydrogenase
L3_121_363G1_scaffold_413_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24574..25302
DNA (729bp) protein (243aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AH33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85650.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_363G1_scaffold_413_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25293..26066
DNA (774bp) protein (258aa)
Uroporphyrinogen-III synthase n=7 Tax=Parabacteroides RepID=A7AH34_9PORP
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EDN85651.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
uroporphyrinogen-III synthase
L3_121_363G1_scaffold_413_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26056..26442
DNA (387bp) protein (129aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=4 Tax=Parabacteroides RepID=A7AH35_9PORP
L3_121_363G1_scaffold_413_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26508..26663
DNA (156bp) protein (52aa)
Putative membrane protein insertion efficiency factor n=3 Tax=Parabacteroides RepID=A7AH36_9PORP
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_363G1_scaffold_413_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26667..27299
DNA (633bp) protein (211aa)
Hydrolase, TatD family n=2 Tax=Parabacteroides merdae RepID=A7AH37_9PORP
Hydrolase, TatD family {ECO:0000313|EMBL:EDN85654.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TatD-related DNase
L3_121_363G1_scaffold_413_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27430..28689
DNA (1260bp) protein (420aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Tyrosine--tRNA ligase n=4 Tax=Parabacteroides RepID=A7AH38_9PORP
tyrosyl-tRNA synthetase 1
L3_121_363G1_scaffold_413_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28953..31670
DNA (2718bp) protein (906aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12745.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
alpha-L-rhamnosidase
L3_121_363G1_scaffold_413_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31923..32411
DNA (489bp) protein (163aa)
Pyridoxamine 5'-phosphate oxidase family protein n=3 Tax=Parabacteroides RepID=A7AH43_9PORP
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EDN85659.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
5-nitroimidazole antibiotic resistance protein
L3_121_363G1_scaffold_413_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32548..33453
DNA (906bp) protein (302aa)
Serine O-acetyltransferase n=3 Tax=Parabacteroides merdae RepID=K5YGP7_9PORP
Putative serine O-acetyltransferase {ECO:0000313|EMBL:EDN85662.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
serine acetyltransferase
L3_121_363G1_scaffold_413_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33546..35051
DNA (1506bp) protein (502aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AAR8_9PORP
THUMP domain protein {ECO:0000313|EMBL:CDD11924.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
N6-adenine-specific DNA methylase
L3_121_363G1_scaffold_413_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35035..37236
DNA (2202bp) protein (734aa)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Parabacteroides merdae RepID=A7AH47_9PORP
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EDN85664.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dipeptidyl peptidase IV
L3_121_363G1_scaffold_413_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37380..38651
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Phosphoribosylamine--glycine ligase n=2 Tax=Parabacteroides merdae RepID=A7AH49_9PORP
phosphoribosylamine--glycine ligase
L3_121_363G1_scaffold_413_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38780..39793
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BER2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12751.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
transmembrane protein
Displaying items 1-30 of 89 in total

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