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L3_121_363G1_scaffold_442

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_442_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(358..975)
DNA (618bp) protein (206aa)
Multimeric flavodoxin WrbA n=1 Tax=Clostridium sp. CAG:122 RepID=R5RRK9_9CLOT
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:CCZ41249.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Multimeric flavodoxin WrbA
L3_121_363G1_scaffold_442_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1271..3208)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76035.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L3_121_363G1_scaffold_442_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3304..4173)
DNA (870bp) protein (290aa)
DegV family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNM0_9FIRM
DegV family protein {ECO:0000313|EMBL:CDD79834.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
EDD domain protein, DegV family
L3_121_363G1_scaffold_442_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4352..5542)
DNA (1191bp) protein (397aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQW6_9FIRM
Carboxyl-terminal protease {ECO:0000313|EMBL:CDD79833.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_363G1_scaffold_442_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5622..6527)
DNA (906bp) protein (302aa)
Cell division protein FtsX n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA5_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cell division protein FtsX
L3_121_363G1_scaffold_442_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6517..7200)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79831.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cell division ATP-binding protein FtsE
L3_121_363G1_scaffold_442_7
unknown

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comp(7379..7471)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_121_363G1_scaffold_442_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7499..8587)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79830.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, CdaR family
L3_121_363G1_scaffold_442_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8734..9606)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79829.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_121_363G1_scaffold_442_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9765..10130)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76028.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Coenzyme PQQ synthesis protein D (PqqD).
L3_121_363G1_scaffold_442_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10155..11069)
DNA (915bp) protein (305aa)
OPT family oligopeptide transporter n=2 Tax=Ruminococcus RepID=C6JG48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79826.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative oligopeptide transporter, OPT family
L3_121_363G1_scaffold_442_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11134..12054)
DNA (921bp) protein (307aa)
OPT family oligopeptide transporter n=2 Tax=Ruminococcus RepID=C6JG48_9FIRM
OPT family oligopeptide transporter {ECO:0000313|EMBL:EES76027.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative oligopeptide transporter, OPT family
L3_121_363G1_scaffold_442_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12233..14032)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76026.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Nitric oxide reductase activation protein
L3_121_363G1_scaffold_442_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14016..14936)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76025.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
MoxR-like ATPases
L3_121_363G1_scaffold_442_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15053..17173)
DNA (2121bp) protein (707aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76024.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_363G1_scaffold_442_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17175..18125)
DNA (951bp) protein (317aa)
YegS//BmrU family lipid kinase n=2 Tax=Ruminococcus RepID=C6JG44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79819.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_121_363G1_scaffold_442_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18340..19134
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79001.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_121_363G1_scaffold_442_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19488..20267)
DNA (780bp) protein (260aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG41_9FIRM
L3_121_363G1_scaffold_442_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20260..21444)
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL84_9FIRM
L3_121_363G1_scaffold_442_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21507..22145)
DNA (639bp) protein (213aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG39_9FIRM
L3_121_363G1_scaffold_442_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22176..23015)
DNA (840bp) protein (280aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMM7_9FIRM
L3_121_363G1_scaffold_442_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23076..24086)
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLV0_9FIRM
L3_121_363G1_scaffold_442_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24079..24657)
DNA (579bp) protein (193aa)
anthranilate synthase, component II (EC:4.1.3.27)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78995.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_363G1_scaffold_442_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24654..26243)
DNA (1590bp) protein (530aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG35_9FIRM
Anthranilate synthase component I {ECO:0000313|EMBL:EES76014.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_363G1_scaffold_442_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26768..28228)
DNA (1461bp) protein (487aa)
Uracil-xanthine permease n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG34_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:EES76013.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
uracil-xanthine permease
L3_121_363G1_scaffold_442_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28499..28864)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76012.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_363G1_scaffold_442_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29921..32896)
DNA (2976bp) protein (992aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76011.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_121_363G1_scaffold_442_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33075..33482)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76010.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
helix-turn-helix domain protein
L3_121_363G1_scaffold_442_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33658..35583)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76009.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_121_363G1_scaffold_442_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35816..36760)
DNA (945bp) protein (315aa)
ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F16F2D
Uncharacterized protein {ECO:0000313|EMBL:CDD77067.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
Displaying items 1-30 of 87 in total

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