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L3_121_363G1_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G1_scaffold_450_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=I8YAS9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EOS03945.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transposase
L3_121_363G1_scaffold_450_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(190..345)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H8N9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03946.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transposase
L3_121_363G1_scaffold_450_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(342..578)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HIT9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03947.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transposase
L3_121_363G1_scaffold_450_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(976..2910)
DNA (1935bp) protein (645aa)
SusD family protein n=5 Tax=Bacteroides RepID=C6Z2Y8_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV66151.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
starch-binding protein
L3_121_363G1_scaffold_450_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2925..5996)
DNA (3072bp) protein (1024aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z2Y9_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET15248.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_121_363G1_scaffold_450_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6038..7936)
DNA (1899bp) protein (633aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroides RepID=C6Z2Z0_9BACE
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EET15249.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
beta-xylosidase/alpha-L-arabinofuranosidase
L3_121_363G1_scaffold_450_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8124..9095)
DNA (972bp) protein (324aa)
Glycosyl hydrolase, family 43 n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8M8_BACVU
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFG17691.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
beta-xylosidase/alpha-L-arabinofuranosidase
L3_121_363G1_scaffold_450_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9108..10229)
DNA (1122bp) protein (374aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Glycosyl hydrolase family 10 n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8M9_BACVU
beta-xylanase
L3_121_363G1_scaffold_450_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10269..11807)
DNA (1539bp) protein (513aa)
Glycoside/pentoside/hexuronide transporter n=7 Tax=Bacteroides RepID=C3R892_9BACE
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EIY38723.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
sugar transporter
L3_121_363G1_scaffold_450_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12090..12881)
DNA (792bp) protein (264aa)
Glycosyl hydrolase family 16 n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8N1_BACVU
Glycosyl hydrolases 16 family protein {ECO:0000313|EMBL:KDS54586.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
beta-glycosidase
L3_121_363G1_scaffold_450_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12972..14360)
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:KDS54587.1}; EC=5.4.2.10 {ECO:0000313|EMBL:KDS54587.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Phosphoglucomutase/phosphomannomutase n=7 Tax=Bacteria RepID=A6KWH0_BACV8
phosphoglucomutase/phosphomannomutase
L3_121_363G1_scaffold_450_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14347..15006)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWB7_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS54588.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_121_363G1_scaffold_450_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15089..16129)
DNA (1041bp) protein (347aa)
DHHA1 domain protein n=4 Tax=Bacteria RepID=D4V8N4_BACVU
exopolyphosphatase-like protein
DHHA1 domain protein {ECO:0000313|EMBL:KDS54589.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_121_363G1_scaffold_450_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16179..18098)
DNA (1920bp) protein (640aa)
ComEC/Rec2-like protein n=3 Tax=Bacteroides RepID=C6Z2Z9_9BACE
ComEC/Rec2-like protein {ECO:0000313|EMBL:EET15258.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
competence protein
L3_121_363G1_scaffold_450_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18145..18798)
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Ribulose-phosphate 3-epimerase n=6 Tax=Bacteroides RepID=A6KWC0_BACV8
ribulose-phosphate 3-epimerase
L3_121_363G1_scaffold_450_16

Not on your lists

comp(18874..20169)
DNA (1296bp) protein (432aa)
RNA polymerase ECF type sigma factor n=1 Tax=uncultured bacterium RepID=S6CPD2_9BACT
hypothetical protein
RNA polymerase ECF type sigma factor {ECO:0000313|EMBL:CCG34988.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L3_121_363G1_scaffold_450_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20172..20714)
DNA (543bp) protein (181aa)
Sigma-70 region 2 n=8 Tax=Bacteria RepID=D4V8N8_BACVU
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS54593.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_121_363G1_scaffold_450_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20872..21654
DNA (783bp) protein (261aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C6Z303_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15262.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_121_363G1_scaffold_450_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21727..22701)
DNA (975bp) protein (325aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Methionyl-tRNA formyltransferase n=5 Tax=Bacteria RepID=FMT_BACV8
L3_121_363G1_scaffold_450_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22715..24517)
DNA (1803bp) protein (601aa)
Chloride transporter, ClC family n=8 Tax=root RepID=C6Z306_9BACE
Putative chloride channel protein {ECO:0000313|EMBL:ABR37785.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
chloride channel protein
L3_121_363G1_scaffold_450_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24527..25102)
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=A6KWH2_BACV8
translation factor
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EIY77729.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_121_363G1_scaffold_450_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25269..26432)
DNA (1164bp) protein (388aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
N-acetylglucosamine-6-phosphate deacetylase n=2 Tax=Bacteria RepID=I9U6Y6_BACVU
N-acetylglucosamine-6-phosphate deacetylase
L3_121_363G1_scaffold_450_23
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26522..29698)
DNA (3177bp) protein (1059aa)
Drug efflux protein n=5 Tax=Bacteria RepID=A6KWH4_BACV8
Drug efflux protein {ECO:0000313|EMBL:EFV66131.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
drug efflux protein
L3_121_363G1_scaffold_450_24
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29695..31182)
DNA (1488bp) protein (496aa)
Outer membrane efflux protein n=6 Tax=Bacteroides RepID=C3R8B2_9BACE
outer membrane protein TolC
Outer membrane efflux protein {ECO:0000313|EMBL:EET15269.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_121_363G1_scaffold_450_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31169..34249)
DNA (3081bp) protein (1027aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P1W3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18307.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
cation efflux system
L3_121_363G1_scaffold_450_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34254..35321)
DNA (1068bp) protein (356aa)
Cation efflux system protein n=2 Tax=Bacteroides RepID=E5UXS9_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS54602.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
cation efflux system protein
L3_121_363G1_scaffold_450_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35374..37023)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HIW3_BACVU
O-Antigen ligase family protein {ECO:0000313|EMBL:KDS54603.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_121_363G1_scaffold_450_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37026..38537)
DNA (1512bp) protein (504aa)
Conserved hypothetical exported protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWH9_BACV8
hypothetical protein
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KDS54604.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_121_363G1_scaffold_450_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38539..39441)
DNA (903bp) protein (301aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Signal peptidase I n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJ56_BACVU
signal peptidase I
L3_121_363G1_scaffold_450_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39450..41354)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HRW6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03975.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
Displaying items 1-30 of 124 in total

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