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L3_121_363G2_scaffold_752

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Displaying items 1-30 of 90 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_363G2_scaffold_752_1
Enterococcus cecorum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(395..793)
DNA (399bp) protein (133aa)
Transcriptional regulatory family protein n=1 Tax=Clostridium difficile CD69 RepID=T3ABM5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ESK61818.1}; TaxID=1121864 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus cecorum DSM 20682 = ATCC 43198.;"
winged helix family two component response transcriptional regulator
L3_121_363G2_scaffold_752_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(876..1520)
DNA (645bp) protein (215aa)
Uncharacterized protein n=23 Tax=Firmicutes RepID=D5Q4R0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFH07116.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
ABC transporter permease
L3_121_363G2_scaffold_752_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1517..2380)
DNA (864bp) protein (288aa)
ABC transporter, ATP-binding protein n=12 Tax=Firmicutes RepID=D5Q4R1_CLODI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH16270.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
ABC-type multidrug transport system, ATPase component
L3_121_363G2_scaffold_752_4
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2381..2758)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A4F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ24242.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
GntR family transcriptional regulator
L3_121_363G2_scaffold_752_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3298..3675)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT50_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10052.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_121_363G2_scaffold_752_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3686..5227)
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72287.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
MobA/MobL family.
L3_121_363G2_scaffold_752_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5542..5769)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72286.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_121_363G2_scaffold_752_8
unknown

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comp(5841..5951)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_121_363G2_scaffold_752_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5945..6187)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23178.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_121_363G2_scaffold_752_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6285..7433)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23177.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_121_363G2_scaffold_752_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7430..7753)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z4U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72283.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_121_363G2_scaffold_752_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7731..8801)
DNA (1071bp) protein (357aa)
Site-specific recombinase XerD n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT45_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL10047.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_121_363G2_scaffold_752_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8823..9005)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6PEK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETD23174.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_121_363G2_scaffold_752_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9239..9763
DNA (525bp) protein (175aa)
Helix-turn-helix n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT44_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL10046.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_121_363G2_scaffold_752_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9950..11527)
DNA (1578bp) protein (526aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Ruminococcus RepID=C6JCE8_9FIRM
GMP synthase
L3_121_363G2_scaffold_752_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12230..14581)
DNA (2352bp) protein (784aa)
xylS; alpha-xylosidase (EC:3.2.1.177)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77443.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_363G2_scaffold_752_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14802..16202)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78551.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_121_363G2_scaffold_752_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17229..17894)
DNA (666bp) protein (222aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCF1_9FIRM
L3_121_363G2_scaffold_752_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18201..18512
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80380.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_121_363G2_scaffold_752_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18791..19765
DNA (975bp) protein (325aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
ATP synthase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR35_9FIRM
ATP synthase {ECO:0000313|EMBL:CDD80381.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_363G2_scaffold_752_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19833..21773
DNA (1941bp) protein (647aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRW2_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_363G2_scaffold_752_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21918..22349
DNA (432bp) protein (144aa)
ATP synthase subunit C. (EC:3.6.3.14)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80383.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_363G2_scaffold_752_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22351..22659
DNA (309bp) protein (103aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCF6_9FIRM
ATP synthase (F/14-kDa) subunit {ECO:0000313|EMBL:CDD80384.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_363G2_scaffold_752_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22822..23409
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77451.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Archaeal/vacuolar-type H+-ATPase subunit E
L3_121_363G2_scaffold_752_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23402..25174
DNA (1773bp) protein (591aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=2 Tax=Ruminococcus RepID=C6JCF8_9FIRM
L3_121_363G2_scaffold_752_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25237..26619
DNA (1383bp) protein (461aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=2 Tax=Ruminococcus RepID=C6JCF9_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_121_363G2_scaffold_752_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26638..27255
DNA (618bp) protein (206aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=2 Tax=Ruminococcus RepID=C6JCG0_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_121_363G2_scaffold_752_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27944..28657)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76098.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_121_363G2_scaffold_752_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28863..30623
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77456.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_121_363G2_scaffold_752_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30812..31597)
DNA (786bp) protein (262aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CD08_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CDD76094.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted hydrolases of the HAD superfamily
Displaying items 1-30 of 90 in total

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