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L3_122_000G1_scaffold_1168

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_1168_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..993
DNA (993bp) protein (331aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTN0_9PORP
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
riboflavin biosynthesis protein ribD
L3_122_000G1_scaffold_1168_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1110..2492
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BUW5_9PORP
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDN87113.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_122_000G1_scaffold_1168_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2580..3299
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z5Z2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06756.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_1168_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3317..4060
DNA (744bp) protein (248aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Isoprenyl transferase n=4 Tax=Parabacteroides RepID=A7ADG9_9PORP
UDP pyrophosphate synthetase
L3_122_000G1_scaffold_1168_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4075..6768
DNA (2694bp) protein (898aa)
Outer membrane protein assembly complex, YaeT protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YUN9_9PORP
Outer membrane protein assembly complex, YaeT protein {ECO:0000313|EMBL:EKN06754.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
outer membrane protein
L3_122_000G1_scaffold_1168_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6977..7492
DNA (516bp) protein (172aa)
Outer membrane protein n=5 Tax=Parabacteroides RepID=A7ADG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15023.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
cationic outer membrane protein OmpH
L3_122_000G1_scaffold_1168_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7565..8062
DNA (498bp) protein (166aa)
Outer membrane protein n=6 Tax=Parabacteroides RepID=A7ADG5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15024.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
cationic outer membrane protein OmpH
L3_122_000G1_scaffold_1168_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8216..9052
DNA (837bp) protein (279aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Glutamate racemase n=3 Tax=Parabacteroides merdae RepID=A7ADG4_9PORP
glutamate racemase
L3_122_000G1_scaffold_1168_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9129..9497)
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7ADG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87105.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_122_000G1_scaffold_1168_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9508..10758)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YUN7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06749.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
metalloendopeptidase-like membrane protein
L3_122_000G1_scaffold_1168_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10755..10922)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTM2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06748.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_122_000G1_scaffold_1168_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11306..11569)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y149_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06747.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_122_000G1_scaffold_1168_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11894..12319
DNA (426bp) protein (142aa)
META domain protein n=3 Tax=Parabacteroides RepID=A7ADF7_9PORP
META domain protein {ECO:0000313|EMBL:CDD11461.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_122_000G1_scaffold_1168_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12342..12773
DNA (432bp) protein (144aa)
META domain protein n=3 Tax=Parabacteroides RepID=A7ADF6_9PORP
META domain protein {ECO:0000313|EMBL:CDD11463.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_122_000G1_scaffold_1168_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12827..14731)
DNA (1905bp) protein (635aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YUN3_9PORP
two-component regulator sensor kinase
L3_122_000G1_scaffold_1168_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14765..15988)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AVF6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06743.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_1168_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16049..16591
DNA (543bp) protein (181aa)
HDIG domain protein n=4 Tax=Parabacteroides RepID=A7ADF3_9PORP
HDIG domain protein {ECO:0000313|EMBL:CDD11469.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_122_000G1_scaffold_1168_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16657..19422
DNA (2766bp) protein (922aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7ADF2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87094.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_122_000G1_scaffold_1168_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19443..20105)
DNA (663bp) protein (221aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Uracil-DNA glycosylase n=2 Tax=Parabacteroides merdae RepID=A7ADF1_9PORP
uracil-DNA glycosylase
L3_122_000G1_scaffold_1168_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20221..21258)
DNA (1038bp) protein (346aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=3 Tax=Parabacteroides RepID=A7ADF0_9PORP
L3_122_000G1_scaffold_1168_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21641..22081
DNA (441bp) protein (147aa)
DoxX family protein n=3 Tax=Parabacteroides merdae RepID=A7ADE7_9PORP
DoxX family protein {ECO:0000313|EMBL:EDN87089.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_122_000G1_scaffold_1168_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22711..24054
DNA (1344bp) protein (448aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z6M3_9PORP
L3_122_000G1_scaffold_1168_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24116..25573
DNA (1458bp) protein (486aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Pseudouridine synthase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z7E5_9PORP
ribosomal large subunit pseudouridine synthase B
L3_122_000G1_scaffold_1168_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25641..27047
DNA (1407bp) protein (469aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=3 Tax=Parabacteroides RepID=A7ADE0_9PORP
L3_122_000G1_scaffold_1168_25
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27115..27588)
DNA (474bp) protein (158aa)
Transcriptional regulator, AsnC family n=3 Tax=Parabacteroides RepID=B7BG02_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77565.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
transcriptional regulator
L3_122_000G1_scaffold_1168_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27739..28302
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y1V0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07037.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_1168_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28926..29393)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z6L9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07036.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_1168_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29415..29912)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z7E0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07035.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_1168_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29947..30420)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YVC3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07034.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_1168_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30429..31166)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZS82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14195.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
MotA/TolQ/ExbB proton channel family protein biopolymer transport protein
Displaying items 1-30 of 103 in total

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