ggKbase home page

L3_122_000G1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_26_1
Prevotella buccalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
Integrase core domain protein n=3 Tax=Prevotella RepID=D1W6F8_9BACT
Integrase core domain protein {ECO:0000313|EMBL:EFA91869.1}; TaxID=679190 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccalis ATCC 35310.;"
Mobile element protein
L3_122_000G1_scaffold_26_2
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(686..1477)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii 1_2_48FAA RepID=E5WZX8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV29527.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
hypothetical protein
L3_122_000G1_scaffold_26_3
unknown

Not on your lists

1652..1765
DNA (114bp) protein (38aa)

This feature has no annotations

L3_122_000G1_scaffold_26_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2034..2342
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X7Q3_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09769.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_000G1_scaffold_26_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2600..3112
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X7Q4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52112.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_122_000G1_scaffold_26_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3115..3336
DNA (222bp) protein (74aa)
DNA-binding protein n=8 Tax=Bacteroidales RepID=C7X7Q5_9PORP
DNA-binding protein {ECO:0000313|EMBL:EEY84928.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
XRE family transcriptional regulator
L3_122_000G1_scaffold_26_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3693..4043)
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X7Q6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52114.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_122_000G1_scaffold_26_8
unknown

Not on your lists

4085..4198
DNA (114bp) protein (38aa)

This feature has no annotations

L3_122_000G1_scaffold_26_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4195..4371
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X7Q7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52115.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_000G1_scaffold_26_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4493..4726)
DNA (234bp) protein (78aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LAS9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42793.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_000G1_scaffold_26_11
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4892..5773
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X7Y1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52189.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_122_000G1_scaffold_26_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5842..7227)
DNA (1386bp) protein (462aa)
ABC transporter substrate-binding protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQT8_9BACE
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EFI09776.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
glycoside hydrolase
L3_122_000G1_scaffold_26_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7240..8652)
DNA (1413bp) protein (471aa)
RNA methyltransferase n=8 Tax=Bacteroidales RepID=A6LAT2_PARD8
RNA methyltransferase
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EKN22544.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_122_000G1_scaffold_26_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9259..11979
DNA (2721bp) protein (907aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=3 Tax=Bacteroidales RepID=D7IQU0_9BACE
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EKN33777.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_122_000G1_scaffold_26_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12360..13454
DNA (1095bp) protein (365aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Two-component system sensor histidine kinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQU1_9BACE
two-component system sensor histidine kinase
L3_122_000G1_scaffold_26_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13513..13902
DNA (390bp) protein (130aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LAT5_PARD8
hypothetical protein
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEU52194.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_000G1_scaffold_26_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13907..14560
DNA (654bp) protein (218aa)
FHA domain protein n=8 Tax=Bacteroidales RepID=C7X7Y7_9PORP
ABC transporter ATP-binding protein
FHA domain protein {ECO:0000313|EMBL:EEU52195.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_000G1_scaffold_26_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14703..14957
DNA (255bp) protein (85aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LAT7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS67555.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_122_000G1_scaffold_26_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14954..15469
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LAT8_PARD8
hypothetical protein
FHA domain-containing protein {ECO:0000313|EMBL:EFI09783.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_000G1_scaffold_26_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15482..16285
DNA (804bp) protein (268aa)
Protein phosphatase n=4 Tax=Bacteroidales RepID=D7IQU6_9BACE
serine/threonine phosphatase
Putative serine/threonine phosphatase {ECO:0000313|EMBL:ABR42803.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_000G1_scaffold_26_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16309..18120
DNA (1812bp) protein (604aa)
Protein kinase domain-containing protein n=3 Tax=Bacteroidales RepID=D7IQU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN29067.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
serine/threonine protein kinase
L3_122_000G1_scaffold_26_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18183..19118
DNA (936bp) protein (312aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LAU1_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09786.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_000G1_scaffold_26_23
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19131..21293
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IAN2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47348.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_122_000G1_scaffold_26_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21296..22192
DNA (897bp) protein (299aa)
Serine O-acetyltransferase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQV0_9BACE
Serine O-acetyltransferase {ECO:0000313|EMBL:EFI09788.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
serine acetyltransferase
L3_122_000G1_scaffold_26_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22267..22665
DNA (399bp) protein (133aa)
NADP-reducing hydrogenase B chain-Desulfovibrio fructosovorans gi|466364|gb|AAA87055.1| potential NAD-reducing hydrogenase subunit n=9 Tax=Bacteroidales RepID=A6LAU4_PARD8
NADP-reducing hydrogenase subunit B
NADP-reducing hydrogenase, subunit B {ECO:0000313|EMBL:EFI09789.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_000G1_scaffold_26_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22687..24477
DNA (1791bp) protein (597aa)
Protein HymB n=3 Tax=Bacteroidales RepID=D7IQV2_9BACE
Protein HymB {ECO:0000313|EMBL:EFI09790.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
NADH:ubiquinone oxidoreductase subunit
L3_122_000G1_scaffold_26_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24492..26282
DNA (1791bp) protein (597aa)
Hydrogenase large subunit HymC n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQV3_9BACE
Hydrogenase large subunit HymC {ECO:0000313|EMBL:EFI09791.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
NADH:ubiquinone oxidoreductase subunit
L3_122_000G1_scaffold_26_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26286..26774
DNA (489bp) protein (163aa)
NADH:ubiquinone oxidoreductase subunit n=9 Tax=Bacteroidales RepID=A6LAU7_PARD8
NADH:ubiquinone oxidoreductase subunit
Putative NAD-dependent formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EEU52206.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_000G1_scaffold_26_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26848..27819)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B398_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09793.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_000G1_scaffold_26_30
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27834..28421)
DNA (588bp) protein (196aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LAU9_PARD8
hypothetical protein
LemA protein {ECO:0000313|EMBL:EFI09794.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Displaying items 1-30 of 179 in total

View Taxonomy