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L3_122_000G1_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_46_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..138)
DNA (138bp) protein (46aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
tal1; transaldolase Tal (EC:2.2.1.2)
Probable transaldolase n=2 Tax=Clostridium butyricum RepID=B1R0W3_CLOBU
L3_122_000G1_scaffold_46_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(179..868)
DNA (690bp) protein (230aa)
Ribulose 5-phosphate epimerase {ECO:0000313|EMBL:KHD16457.1}; EC=5.1.3.4 {ECO:0000313|EMBL:KHD16457.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Class II aldolase/adducin family protein n=2 Tax=Clostridium RepID=A6M1T4_CLOB8
sgaE; L-ribulose-5-phosphate 4-epimerase
L3_122_000G1_scaffold_46_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1168..2241)
DNA (1074bp) protein (358aa)
Regulatory protein GntR, HTH n=2 Tax=Clostridium RepID=A6M1T5_CLOB8
GntR family transcriptional regulator {ECO:0000313|EMBL:KHD16456.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
regulatory protein GntR, HTH
L3_122_000G1_scaffold_46_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2614..4083
DNA (1470bp) protein (490aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
araA; L-arabinose isomerase AraA (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLT5_CLOSA
L3_122_000G1_scaffold_46_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4352..5398
DNA (1047bp) protein (349aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
UPI0003D5E4E7 related cluster n=2 Tax=unknown RepID=UPI0003D5E4E7
aldose 1-epimerase
L3_122_000G1_scaffold_46_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5452..6327)
DNA (876bp) protein (292aa)
Hydrolase n=2 Tax=Clostridium butyricum RepID=B1QZD2_CLOBU
Hydrolase, Cof family {ECO:0000313|EMBL:EEP52656.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Cof-like hydrolase
L3_122_000G1_scaffold_46_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6433..7116
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JNB8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96599.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L3_122_000G1_scaffold_46_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7221..8309)
DNA (1089bp) protein (363aa)
Cell wall binding repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1QZD0_CLOBU
Choline binding protein A {ECO:0000313|EMBL:KJZ86028.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
SCP-like extracellular
L3_122_000G1_scaffold_46_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8791..9483
DNA (693bp) protein (231aa)
PHP domain protein n=2 Tax=Clostridium butyricum RepID=B1QZC9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86007.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative metal-dependent phosphoesterase, PHP family
L3_122_000G1_scaffold_46_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9563..11323)
DNA (1761bp) protein (587aa)
recQ1; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
ATP-dependent DNA helicase RecQ n=2 Tax=Clostridium butyricum RepID=B1QZC8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86060.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_122_000G1_scaffold_46_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11621..13633)
DNA (2013bp) protein (671aa)
UPI0003D62582 related cluster n=1 Tax=unknown RepID=UPI0003D62582
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KJZ86053.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
methyl-accepting chemotaxis sensory transducer with cache sensor
L3_122_000G1_scaffold_46_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13888..14520)
DNA (633bp) protein (211aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thiE1; thiamine-phosphate synthase ThiE (EC:2.5.1.3)
Thiamine-phosphate synthase n=2 Tax=Clostridium butyricum DKU-01 RepID=M8JNB2_CLOBU
L3_122_000G1_scaffold_46_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14578..15411)
DNA (834bp) protein (278aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thiM; hydroxyethylthiazole kinase ThiM (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM23_CLOBU
L3_122_000G1_scaffold_46_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15436..16737)
DNA (1302bp) protein (434aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
thiC; phosphomethylpyrimidine synthase ThiC (EC:4.1.99.17)
Phosphomethylpyrimidine synthase n=2 Tax=Clostridium butyricum RepID=M8K8L0_CLOBU
L3_122_000G1_scaffold_46_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16940..17770)
DNA (831bp) protein (277aa)
Phosphomethylpyrimidine kinase n=2 Tax=Clostridium butyricum RepID=M8KGS8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95457.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
phosphomethylpyrimidine kinase
L3_122_000G1_scaffold_46_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17846..18370)
DNA (525bp) protein (175aa)
ThiW protein n=2 Tax=Clostridium butyricum RepID=R0AUB6_CLOBU
Substrate-specific component ThiW of predicted thiazole ECF transporter {ECO:0000313|EMBL:KJZ86120.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thiW protein
L3_122_000G1_scaffold_46_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18770..20095)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=2 Tax=Clostridium butyricum RepID=M8JNA8_CLOBU
Multidrug transporter MatE {ECO:0000313|EMBL:KHD16444.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
multi antimicrobial extrusion protein MatE
L3_122_000G1_scaffold_46_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20234..21067)
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=M8JM18_CLOBU
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KJZ96614.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
AraC family transcriptional regulator
L3_122_000G1_scaffold_46_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21255..21431)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K8K6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35618.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_122_000G1_scaffold_46_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21586..22140)
DNA (555bp) protein (185aa)
UPI0003D653F3 related cluster n=1 Tax=unknown RepID=UPI0003D653F3
Uncharacterized protein {ECO:0000313|EMBL:KJZ86067.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_122_000G1_scaffold_46_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22082..22339)
DNA (258bp) protein (86aa)
Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QZB7_CLOBU
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ95480.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
AraC family transcriptional regulator
L3_122_000G1_scaffold_46_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22481..24016)
DNA (1536bp) protein (512aa)
UPI0003D5A8B4 related cluster n=1 Tax=unknown RepID=UPI0003D5A8B4
ABC transporter ATP-binding protein uup {ECO:0000313|EMBL:KJZ86038.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter ATP-binding protein
L3_122_000G1_scaffold_46_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24291..24515
DNA (225bp) protein (75aa)
UPI0003D63876 related cluster n=1 Tax=unknown RepID=UPI0003D63876
Uncharacterized protein {ECO:0000313|EMBL:ETI88288.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_122_000G1_scaffold_46_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24521..25066)
DNA (546bp) protein (182aa)
UPI0003D61D50 related cluster n=1 Tax=unknown RepID=UPI0003D61D50
Uncharacterized protein {ECO:0000313|EMBL:KJZ95461.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_122_000G1_scaffold_46_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25185..25640)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDA1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16429.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RRF2 family protein
L3_122_000G1_scaffold_46_26
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25792..26691
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNQ4_CLOBU
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ADO78163.1}; Flags: Precursor;; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
L3_122_000G1_scaffold_46_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27045..27983
DNA (939bp) protein (313aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8JMG2_CLOBU
L3_122_000G1_scaffold_46_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28136..29059)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASA0_CLOBU
Choline binding protein A {ECO:0000313|EMBL:KJZ86125.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_122_000G1_scaffold_46_29
unknown

Not on your lists

comp(29126..29254)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_122_000G1_scaffold_46_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29305..29970)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGX5_CLOBU
Trk system potassium uptake protein trkA {ECO:0000313|EMBL:KJZ86140.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
TrkA domain-containing protein
Displaying items 1-30 of 158 in total

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