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L3_122_000G1_scaffold_121

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_121_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1751)
DNA (1749bp) protein (583aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Carbamoyl-phosphate synthase, large subunit n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFB1_9PORP
carbamyl phosphate synthetase
L3_122_000G1_scaffold_121_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1801..2952)
DNA (1152bp) protein (384aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFH5_9PORP
L3_122_000G1_scaffold_121_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2990..4882)
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14425.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
amidophosphoribosyltransferase
L3_122_000G1_scaffold_121_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5153..5671)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSC9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14426.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
acetyltransferase
L3_122_000G1_scaffold_121_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5686..10545)
DNA (4860bp) protein (1620aa)
RecQ family ATP-dependent DNA helicase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YKX0_9PORP
RecQ family ATP-dependent DNA helicase {ECO:0000313|EMBL:EKN14427.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_121_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10812..12356
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZYI5_9PORP
two-component system sensor histidine kinase
L3_122_000G1_scaffold_121_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12694..17217
DNA (4524bp) protein (1508aa)
Class II glutamine amidotransferase n=2 Tax=Parabacteroides merdae RepID=A7AFF1_9PORP
Class II glutamine amidotransferase {ECO:0000313|EMBL:EDN86777.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glutamate synthase, large subunit
L3_122_000G1_scaffold_121_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17360..18793
DNA (1434bp) protein (478aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Parabacteroides merdae RepID=A7AFF2_9PORP
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:EKN14493.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glutamate synthase, small subunit
L3_122_000G1_scaffold_121_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18820..20484
DNA (1665bp) protein (555aa)
Asparagine synthetase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A892_9PORP
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EKN14494.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
asnB; asparagine synthetase B
L3_122_000G1_scaffold_121_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20597..22582)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZT47_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14495.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_121_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22711..23490)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13243.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_122_000G1_scaffold_121_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23784..24122)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL31_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14497.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
cupin
L3_122_000G1_scaffold_121_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24194..27778
DNA (3585bp) protein (1195aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFH5_9PORP
beta-galactosidase
L3_122_000G1_scaffold_121_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27962..29602
DNA (1641bp) protein (547aa)
Bacterial alpha-L-rhamnosidase n=3 Tax=Parabacteroides RepID=A7AFG1_9PORP
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:EDN86787.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L3_122_000G1_scaffold_121_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30043..30867
DNA (825bp) protein (275aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Diaminopimelate epimerase n=3 Tax=Parabacteroides merdae RepID=A7AFG2_9PORP
dapF; diaminopimelate epimerase
L3_122_000G1_scaffold_121_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30894..32123
DNA (1230bp) protein (410aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
LL-diaminopimelate aminotransferase n=3 Tax=Parabacteroides merdae RepID=A7AFG3_9PORP
L,L-diaminopimelate aminotransferase
L3_122_000G1_scaffold_121_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32191..34377
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14502.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glutamine synthetase
L3_122_000G1_scaffold_121_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34510..34773
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14230.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_122_000G1_scaffold_121_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34896..36827
DNA (1932bp) protein (644aa)
nadE; NAD synthetase (EC:6.3.1.5)
NAD+ synthetase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFP8_9PORP
NAD+ synthetase {ECO:0000313|EMBL:EKN14504.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_122_000G1_scaffold_121_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37482..38891)
DNA (1410bp) protein (470aa)
Tat pathway signal sequence domain protein n=4 Tax=Parabacteroides RepID=A7AFH0_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD13846.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Gfo/Idh/MocA family oxidoreductase
L3_122_000G1_scaffold_121_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38965..40245)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K5ZSK3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14506.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ATP-dependent RNA helicase DeaD
L3_122_000G1_scaffold_121_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40355..42184
DNA (1830bp) protein (610aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B577_9PORP
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EKN14507.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ATP-dependent DNA helicase
L3_122_000G1_scaffold_121_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42242..43258
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFI5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14508.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_121_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43292..44038
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFQ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14509.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_121_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43960..44550)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZT62_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14510.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_121_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44534..45535)
DNA (1002bp) protein (334aa)
para-aminobenzoate synthase component I (EC:2.6.1.85)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14511.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_122_000G1_scaffold_121_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45532..46407)
DNA (876bp) protein (292aa)
Hydrolase, carbon-nitrogen family n=4 Tax=Parabacteroides RepID=A7AFH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14512.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
beta-ureidopropionase
L3_122_000G1_scaffold_121_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46446..47483)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFJ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14513.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_122_000G1_scaffold_121_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47546..49102)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AFI0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86806.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_122_000G1_scaffold_121_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49168..51060)
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZT67_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14515.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative transmembrane AraC family transcriptional regulator
Displaying items 1-30 of 81 in total

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