ggKbase home page

L3_122_000G1_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_212_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

479..1315
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95838.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Site-specific recombinase XerD
L3_122_000G1_scaffold_212_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1312..2235
DNA (924bp) protein (308aa)
Phage integrase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YD75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17005.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
integrase family protein
L3_122_000G1_scaffold_212_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2319..3419
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41471.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted membrane protein
L3_122_000G1_scaffold_212_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3668..5404)
DNA (1737bp) protein (579aa)
alpha-phosphoglucomutase (EC:5.4.2.8 5.4.2.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41472.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_122_000G1_scaffold_212_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5509..7224)
DNA (1716bp) protein (572aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMF5_9CLOT
transcription termination factor Rho
L3_122_000G1_scaffold_212_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7463..8779)
DNA (1317bp) protein (439aa)
Recombination factor protein RarA n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU38_9CLOT
Recombination factor protein RarA {ECO:0000313|EMBL:EEG57396.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ATPase AAA
L3_122_000G1_scaffold_212_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8833..9522)
DNA (690bp) protein (230aa)
Peptidoglycan-N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJJ68525.1}; EC=3.5.1.104 {ECO:0000313|EMBL:KJJ68525.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNA4_9CLOT
polysaccharide deacetylase
L3_122_000G1_scaffold_212_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9664..11568)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41479.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycoside hydrolase
L3_122_000G1_scaffold_212_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11765..12820)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41480.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell wall binding repeat-containing protein
L3_122_000G1_scaffold_212_10
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13011..14882)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZ91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98030.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
choline/ethanolamine kinase
L3_122_000G1_scaffold_212_11
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15063..16481)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3V8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49986.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_122_000G1_scaffold_212_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16468..17886)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00947.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type uncharacterized transport system.
L3_122_000G1_scaffold_212_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17886..18749)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49984.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_122_000G1_scaffold_212_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18746..19699)
DNA (954bp) protein (318aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RM53_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC49983.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC transporter
L3_122_000G1_scaffold_212_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19803..21011)
DNA (1209bp) protein (403aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYG3_9FIRM
L3_122_000G1_scaffold_212_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21001..21681)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34603.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
winged helix family two component transcriptional regulator
L3_122_000G1_scaffold_212_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21832..23946)
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41482.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glutamine synthetase
L3_122_000G1_scaffold_212_18
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24234..25103)
DNA (870bp) protein (290aa)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EEG57412.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EEG57412.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU23_9CLOT
L3_122_000G1_scaffold_212_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25217..26713)
DNA (1497bp) protein (499aa)
threonine synthase (EC:4.2.3.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41491.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_122_000G1_scaffold_212_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26976..27707
DNA (732bp) protein (244aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMK6_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CCY41499.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter
L3_122_000G1_scaffold_212_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27768..28643
DNA (876bp) protein (292aa)
Extracellular solute-binding protein family 3 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IML4_9CLOT
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CCY41504.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
family 3 extracellular solute-binding protein
L3_122_000G1_scaffold_212_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28666..29403
DNA (738bp) protein (246aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHJ8_9CLOT
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:CCY41505.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
polar amino acid ABC transporter inner membrane subunit
L3_122_000G1_scaffold_212_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29400..30062
DNA (663bp) protein (221aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXV0_9CLOT
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:CCY41506.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
polar amino acid ABC transporter inner membrane subunit
L3_122_000G1_scaffold_212_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30076..30669
DNA (594bp) protein (198aa)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMM2_9CLOT
Cytidylate kinase {ECO:0000313|EMBL:CCY41509.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cytidylate kinase
L3_122_000G1_scaffold_212_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30791..31585
DNA (795bp) protein (265aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF70_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
sugar fermentation stimulation protein
L3_122_000G1_scaffold_212_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31648..31878
DNA (231bp) protein (77aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9WV54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ62025.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_122_000G1_scaffold_212_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31978..33291
DNA (1314bp) protein (438aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV95_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CCY40636.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
MATE efflux family protein
L3_122_000G1_scaffold_212_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33312..35294)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41525.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative ATP dependent RNA helicase
L3_122_000G1_scaffold_212_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35298..35693)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41528.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_122_000G1_scaffold_212_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35959..37044
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41529.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
Displaying items 1-30 of 84 in total

View Taxonomy