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L3_122_000G1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_000G1_scaffold_232_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..1018
DNA (1017bp) protein (339aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7R5_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFW05836.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_122_000G1_scaffold_232_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1307..1861
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96978.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
accessory gene regulator B
L3_122_000G1_scaffold_232_3
unknown

Not on your lists

1884..2009
DNA (126bp) protein (42aa)

This feature has no annotations

L3_122_000G1_scaffold_232_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2031..3290
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT
sensor histidine kinase
L3_122_000G1_scaffold_232_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3512..4774
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT
sensor histidine kinase
L3_122_000G1_scaffold_232_6
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5059..5631
DNA (573bp) protein (191aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Bacillus RepID=C3AK16_BACMY
Uncharacterized protein {ECO:0000313|EMBL:KEZ88457.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
L3_122_000G1_scaffold_232_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5624..6913
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26567.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_122_000G1_scaffold_232_8
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7198..7590
DNA (393bp) protein (131aa)
Sigma-70 region 2 n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7F3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ESL03586.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
RNA polymerase sigma factor, sigma-70 family
L3_122_000G1_scaffold_232_9
unknown

Not on your lists

7610..8773
DNA (1164bp) protein (388aa)

This feature has no annotations

L3_122_000G1_scaffold_232_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8815..9663)
DNA (849bp) protein (283aa)
LD-carboxypeptidase family protein {ECO:0000313|EMBL:ACD24527.1}; Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CDH91414.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CDH91414.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
LD-carboxypeptidase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN89_CLOBB
LD-carboxypeptidase family protein
L3_122_000G1_scaffold_232_11
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9796..11562
DNA (1767bp) protein (589aa)
Xaa-Pro aminopeptidase 1 (EC:3.4.11.9)
Putative Xaa-Pro aminopeptidase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENM7_9CLOT
Putative Xaa-Pro aminopeptidase 1 {ECO:0000313|EMBL:CDG02782.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L3_122_000G1_scaffold_232_12

Not on your lists

11747..12880
DNA (1134bp) protein (378aa)
Membrane protein n=1 Tax=uncultured organism RepID=M1P0K2_9ZZZZ
Membrane protein {ECO:0000313|EMBL:AGF92881.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
L3_122_000G1_scaffold_232_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12873..13376
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57020.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_122_000G1_scaffold_232_14
unknown

Not on your lists

13471..13656
DNA (186bp) protein (62aa)

This feature has no annotations

L3_122_000G1_scaffold_232_15
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13808..14494)
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2K9_CLOPA
GntR family transcriptional regulator {ECO:0000313|EMBL:ETD70665.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
GntR family transcriptional regulator
L3_122_000G1_scaffold_232_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14625..16022
DNA (1398bp) protein (466aa)
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9E6_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU72699.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_122_000G1_scaffold_232_17
unknown

Not on your lists

16238..16573
DNA (336bp) protein (112aa)

This feature has no annotations

L3_122_000G1_scaffold_232_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16575..16838)
DNA (264bp) protein (88aa)
Putative Phosphoesterase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F0C8_9CLOT
Putative Phosphoesterase {ECO:0000313|EMBL:CDG02021.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_122_000G1_scaffold_232_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17357..17815
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287FB2B
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABG86537.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_122_000G1_scaffold_232_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18095..18481
DNA (387bp) protein (129aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QCM0_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EKY25425.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulator, GntR family
L3_122_000G1_scaffold_232_21
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18492..19877
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1H5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EYE87314.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
L3_122_000G1_scaffold_232_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20015..20629
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJU70438.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_122_000G1_scaffold_232_23
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20727..21515)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FRA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14580.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_122_000G1_scaffold_232_24
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21723..21920
DNA (198bp) protein (66aa)
Helix-turn-helix domain-containing protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUU0_9CLOT
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EET87019.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
transcriptional regulator, XRE family
L3_122_000G1_scaffold_232_25
unknown

Not on your lists

21932..22342
DNA (411bp) protein (137aa)

This feature has no annotations

L3_122_000G1_scaffold_232_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22451..23578
DNA (1128bp) protein (376aa)
Thermophilic metalloprotease family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMW8_CLOPF
Thermophilic metalloprotease family protein {ECO:0000313|EMBL:EDT24874.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
metalloprotease
L3_122_000G1_scaffold_232_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23710..24369
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y215_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82711.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_122_000G1_scaffold_232_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24688..25677
DNA (990bp) protein (330aa)
Enzyme involved in biofilm formation {ECO:0000313|EMBL:CDS89235.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDS89235.1};; Oxidoreductase {ECO:0000313|EMBL:CKH89362.1}; EC=1.1.1.292 {ECO:0000313|EMBL:CKH89362.1};; Putative NAD(P)-binding oxidoreductase {ECO:0000313|EMBL:CDS88633.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Oxidoreductase , NAD-binding Rossmann fold family protein n=174 Tax=Clostridium difficile RepID=T3G9C5_CLODC
putative NAD(P)-binding oxidoreductase
L3_122_000G1_scaffold_232_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25714..26781)
DNA (1068bp) protein (356aa)
2-nitropropane dioxygenase (EC:1.13.12.16)
2-nitropropane dioxygenase-like enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3H1_9CLOT
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:EKQ55067.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_122_000G1_scaffold_232_30
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27276..28421
DNA (1146bp) protein (382aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIP9_9CLOT
hypothetical protein
Displaying items 1-30 of 92 in total

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